Gene VSAL_I1669 details

Gene Information

• Locus tag: VSAL_I1669
• Symbol: dnaK
• ID: 6988697
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1763657
• End bp: 1765555
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643379994
• Product: molecular chaperone DnaK
• Protein accession: YP_002263094
• Protein GI: 209695165
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.27478
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAAA TCATTGGTAT CGACCTAGGT ACAACGAATT CTTGTGTTGC TGTTTTAGAT 
GGCGACACTC CACGTATCTT AGAAAATGCG GAAGGCGAAC GCACAACTGC ATCGGTAGTT 
GCCTACACAG ATGGCGAAAC ACTTGTAGGC CAACCTGCAA AACGTCAAGC AATTACTAAC 
CCACAAAATA CATTATTTGC GATTAAGCGT CTTATCGGTC GTCGTTTTGA AGACGAAGAA 
GTACAACGCG ATATCGAAAT CATGCCGTAC AAAATCGTTA AAGCTGATAA CGGTGATGCT 
TGGGTTGAAG CGCGAGGCCA AAAAATGGCG GCTCCTCAAG TGTCTGCTGA AATTCTGAAG 
AAAATGAAGA AAACAGCCGA AGATTTCCTA GGTGAAGAAG TCACTGGTGC CGTAATAACG 
GTTCCTGCTT ACTTTAACGA TGCTCAGCGT CAAGCAACGA AAGATGCAGG TCGTATTGCC 
GGTCTTGAAG TGAAACGTAT CATCAATGAA CCAACAGCAG CAGCGCTAGC TTACGGTCTA 
GACAAAAAAG GCGGAGATCG CACTATCGCA GTATACGACC TTGGTGGTGG TACCTTCGAT 
ATTTCAATTA TTGAAATCGA TAATGTTGAT GGCGAGCAAA CTTTCGAAGT GTTAGCGACA 
AACGGCGATA CTCACCTAGG TGGTGAAGAT TTCGATAACC GTATGATCAA TTTCTTAGTT 
GACGAGTTCA AAAAAGAACA AGGTATCAAC CTTAAAAATG ATCCACTGGC TATGCAACGA 
GTGAAAGAAG CGGCAGAAAA AGCAAAGATT GAATTGTCTT CAGCTCAACA AACGGACGTA 
AACCTTCCTT ATGTTACGGC TGATGCAACG GGTCCTAAGC ACATGAATGT TAAAGTGACT 
CGTGCAAAAC TCGAATCTCT AGTTGAAGAC TTAGTGGTTC GTACGCTTGA ACCGCTAAAA 
GTGGCTCTAG CAGATGCGGG TTTATCAATC GATGGGATCA CTGATGTTAT TCTCGTTGGC 
GGGCAAACAC GTATGCCTAT GGTTCAAGCT AAAGTGGCTG AATTCTTTGG TAAAGAAGCG 
CGTCGTGATG TAAACCCTGA TGAAGCCGTC GCAATGGGTG CAGCCGTTCA AGCTGGCGTA 
TTGTCTGGTG ATGTTAAGGA TGTACTTCTT TTAGATGTTA CTCCTCTTTC TTTCGGTATC 
GAAACGATGG GTGGTGTTAT GACGAAGCTT ATTGAGAAAA ACACAACAAT CCCAACTAAA 
GCGGATCAAA CGTTCTCAAC GGCTGAAGAT AACCAAAGTG CGGTAACAAT CCACGTACTT 
CAAGGTGAGC GTAAGCAAGC GACCTACAAC AAGTCTCTGG GTCAATTTAA CCTAGAAGGG 
ATCCAAGCAG CACCGCGTGG CATGGCACAA ATCGAAGTCA CTTTCGATCT AGATGCAGAT 
GGTATCTTAA ACGTATCAGC AAAAGATAAA ACAACGGGTA AAGAACAAAA GATCACTATC 
CAAGCGTCTG GCGGTCTAAC ACCTGAAGAA ATCGAAGCAA TGGTACAAGA AGCCGAAGCG 
AATAAAGACG CGGACAAAAA GTTCGAAGAA TTAGTTGTTG CTCGCAACCA AGCGGATCAG 
ATGATCCACG GCACTAAGAA ACAAGTTGAA GAAGCAGGCG ATGCACTTCC AGCTGACGAG 
AAAGAAAAAA TCGACGCGGC AATCAAAGCA CTAGAAAGCG TTAAATCTGG TGATGATAAA 
GACGCAATCG ATACGAAAAC TCAAGAGCTA GGTCAAGCAG CACAAAAGCT AATGGAAATC 
GCTCAGCAAA AAGCCCAAGC ACAACAAAGT GCTGAAGCAG GAGCACAACC CAAGCAAGAA 
GATGATGTCA TTGATGCTGA GTTTGAAGAG GTAAAATAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVLD GDTPRILENA EGERTTASVV AYTDGETLVG QPAKRQAITN 
PQNTLFAIKR LIGRRFEDEE VQRDIEIMPY KIVKADNGDA WVEARGQKMA APQVSAEILK 
KMKKTAEDFL GEEVTGAVIT VPAYFNDAQR QATKDAGRIA GLEVKRIINE PTAAALAYGL 
DKKGGDRTIA VYDLGGGTFD ISIIEIDNVD GEQTFEVLAT NGDTHLGGED FDNRMINFLV 
DEFKKEQGIN LKNDPLAMQR VKEAAEKAKI ELSSAQQTDV NLPYVTADAT GPKHMNVKVT 
RAKLESLVED LVVRTLEPLK VALADAGLSI DGITDVILVG GQTRMPMVQA KVAEFFGKEA 
RRDVNPDEAV AMGAAVQAGV LSGDVKDVLL LDVTPLSFGI ETMGGVMTKL IEKNTTIPTK 
ADQTFSTAED NQSAVTIHVL QGERKQATYN KSLGQFNLEG IQAAPRGMAQ IEVTFDLDAD 
GILNVSAKDK TTGKEQKITI QASGGLTPEE IEAMVQEAEA NKDADKKFEE LVVARNQADQ 
MIHGTKKQVE EAGDALPADE KEKIDAAIKA LESVKSGDDK DAIDTKTQEL GQAAQKLMEI 
AQQKAQAQQS AEAGAQPKQE DDVIDAEFEE VK