| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1600 |
|---|
| Symbol | |
|---|
| ID | 6987226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1708107 |
|---|
| End bp | 1708508 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643379932 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002263032 |
|---|
| Protein GI | 209695103 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.039384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTTA AACGTATAAT AGTCAGTTTT TTATTTGTTC TTAGTTTATT TTCATCTTTT
ACATGGGCCA GTAACTCTGA TGTAAAAGGT GCTTTTGATT CACAGCGAAG TGATGTTCAA
GTCGAAGGGG TCGGTGAGGT GGTTCGAGTA TTGCCTGATG ATAATAAAGG CTCAAGGCAT
CAAAAGTTCA TTCTGCGATT AGATAATAAT TTAACGATCC TTATTGCTCA TAATATAGAT
TTAGCGCCAA GGATTCCAAA CCTAAGAAAA GGTGACAGTG TGACCTTTTA TGGAGAGTAT
GAATATTCAA GAAAAGGAGG TGTTGTTCAT TGGACTCATC TTGATCCAAG AAATCGTCAT
ACTCATGGAT GGTTAAAGCA CAATGGGCGT ACCTACGAAT AG
|
|---|
| Protein sequence | MIVKRIIVSF LFVLSLFSSF TWASNSDVKG AFDSQRSDVQ VEGVGEVVRV LPDDNKGSRH
QKFILRLDNN LTILIAHNID LAPRIPNLRK GDSVTFYGEY EYSRKGGVVH WTHLDPRNRH
THGWLKHNGR TYE
|
|---|
| |