Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1494 |
Symbol | |
ID | 6989017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1604231 |
End bp | 1604734 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643379832 |
Product | putative acetyltransferase |
Protein accession | YP_002262932 |
Protein GI | 209695003 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.190501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGTAA TAGTGAGAGG CGTTAGAAAA GAAGATTCTC AAGGCATCAT TAATGTATTA AACCCTATTA TCGAGGGCGG TCTTTTTTCT ATTTTAGATA CTCCATTTTC GGTTGAGGAA GAGGCGCAGT TTATTGAAGC GTTTCCAGAG AGAGGAGTTT TTAATGTCGC TCTCGATGTT GATGGAGCAT GTGTTGTAGG TTTTCAAAAT GTAGAACCTT TTGCGACGTA CACTCGTGCT TTTGATCATG TTGGAATTAT TGGTACCTTT GTCGATGAAC AATACCGAAG ACAAGGCATT GCAACGGCAT TGTTTGACGC TACATTTACC GTTGCGAAAT CGAAAGGGTA TGAGAAGTTA TTTGCGTACG TTAGAGGTGA TAATGAAAAT GCCTTGGCTA CGTATTTAAA GCAAGGGTTT GAGATCGTTG GTACCGCAAA GAATCATGCT AAAATTCGTG GGAAATACAT TGATGAAATA CTCATCGAAA AATTTCTATG GTAG
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Protein sequence | MGVIVRGVRK EDSQGIINVL NPIIEGGLFS ILDTPFSVEE EAQFIEAFPE RGVFNVALDV DGACVVGFQN VEPFATYTRA FDHVGIIGTF VDEQYRRQGI ATALFDATFT VAKSKGYEKL FAYVRGDNEN ALATYLKQGF EIVGTAKNHA KIRGKYIDEI LIEKFLW
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