| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1486 |
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| Symbol | |
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| ID | 6987135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1596113 |
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| End bp | 1596643 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379825 |
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| Product | cold-shock protein |
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| Protein accession | YP_002262925 |
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| Protein GI | 209694996 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00940094 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGTC AAGTTGTTCG TTGGATTGAT AATAAAGGGT TTGGTTTTAT TCGGGGGAAT
GATCCCGATA ATGATAATGA AGTATTTGCT CATATTTCAC AGTTTAAAAA AGGATACCGC
AGGCCAAGGG TAGGTGATGA AGTTGTCTTT TTAATTGGTT ATGAGGATGG TAAAAAAGTA
GCCAACACCA TTTCGTTGAT AAACGTTAAA CCTTTGAAGG TCACTAATGC GACAGCAGTA
AGGCTAAGCA AAGTGATTAC CTTATTTTTT ATTTTCACTC TATTTTTTCT TTATCTCTTT
TTTATTACTT GGGAAGTCAC TCCATTTTAT TCACCACCTT CTTATGATGA ATCGGAAGCG
CCAATAAGAG TACGTCAAAA CACGGGTTTT AGGTGTGAAG GAAAAACCCG TTGTACTCAA
ATGAATTCAT GCGATGAAGC GAAGTTCTAC CTTCGTTATT GTCCAAACGT TAAGATCGAT
GGCGATGATG ATGGAACGCC TTGTGAGCGA CAGTTTTGTG GGGCGTGGTA G
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| Protein sequence | MEGQVVRWID NKGFGFIRGN DPDNDNEVFA HISQFKKGYR RPRVGDEVVF LIGYEDGKKV
ANTISLINVK PLKVTNATAV RLSKVITLFF IFTLFFLYLF FITWEVTPFY SPPSYDESEA
PIRVRQNTGF RCEGKTRCTQ MNSCDEAKFY LRYCPNVKID GDDDGTPCER QFCGAW
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