Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1429 |
Symbol | |
ID | 6987084 |
Type | misc_feature |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1540933 |
End bp | 1544624 |
Gene Length | 3692 bp |
Protein Length | |
Translation table | |
GC content | 40% |
IMG OID | |
Product | |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.367777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAA AACTTGAATT ATTGGCACCT GGTGGTGATG TTGAAGCGAT TAAAGCGGCC ATCGTTGCAG GAGCAAATGC TGTTTACTGT GGTCTAGATA TGTTCAACGC CCGTAACCGA GCATCCAATC TTTCATTTGA TGAACTAAAT GGCGTGTTAC GACTTGCTCA TGAATACGGT TGTGAAGTAT TCCTGACATT AAACGTTGTT ATTCTTGAAC ATGAAATTAA ATCATTAGCG AAGCTACTTA ATCAATTAGT GAACACAACT ATTGATGGCA TCATCGTTCA AGATTTGGGT GTGTTTAACT TAGTTAAAAA ATACTTCCCA ACATTAGATG TTCACGCTTC TACTCAGTTA ACGACGCACA ATGAAGGTCA AATTCACTTC CTTTCAAAAG TCGGTGCATC ACGTGTTAAC TTATCCCGCG AACTGAATAT CGACGAAATC AAAGAAATGA CAGCCGTTGC CCATGAACAC GATATCCTAA CGGAAGTGTT TGTGCATGGT TCGTTGTGTA TTGCTTTCTC TGGTCAATGT TATTCAAGCT CAGTGAGTGT GGGTAACTCG GGTAACCGTG GTCGTTGTAG TCAAGCGTGT CGTGATGAAT ATGAAATTAC CGCAGCGGGT AACAAATTCC CATTAAACCT AAAAGATAAC TCAGCGTACT TCGATTTACC GGAACTTGAA GGTAAGGAAT TTGAATGTTG CTGAGTTAGC ATTGGCCCGT CTAAAAAAGC CAATTTCACC ATCGCTGTTT TTTTAAAAGG TATCGAAAAT ATAATTATCG GGGATTTTAT AACTGTTTTA GCCCTATTTC ATGAGTTTTA GATACACTTA TCCTACAAAC CTTATTATGC TGCCCTCAAT TCTGACTGAA CTATCGCATG GGTGACTAAA TCATTGACCG AATTTCCGAC TCGGAAATTC GTAAACACCA GACGACTTTC ACATAAAATA CATTCGTACG GATCTACTTT TACATATCCT TTTAACATTG CGGCATACCC TGGCATTTTC GGCTCAGCTT CTATTGTCAT ACCTAAAGCT GCATAAACTC TAGGCAGAGC TTCTCCACGA CGACGCATTG ATAAAAAACC GTAGTATCGG ATCATCTTGA AATGTTTATC AGGATAGTGC TCTACTATCC GTCTTATCAT CTCTTCTGGT GATAATGTTA GGCTGTCTGT TGTTCCTGTT CGATGGTCTA AATAATTAAA CGTTATCATT CCGCCTTTGG CGTAATGACT TAAACGTGAC GCTGAAATTG GGGGCCGTTT TAAATACCGA CCAAGATAGT TCATCGTCGG TTTTACATTA TTTGTCTTTT TAGCAAAATG AAGCTTCCAA CGACGATTAT ATTGACTGCT TAAAAAGCGT GACCAATCCG TTTTATTACG GATATAGGGG CATTCTTCGC TTGATAAATC AAGCTCATAA TAAGCCTTAC CCAATAAACT GACGATAGCC GCTCTCCAAC AAGGCTCTGT CGTTTTCATT TGGAAGTAAA TGGGTTTCCA TAAACCGGTA CGTTCACAAA TTCCCCCACG AGTGACCGAT AAATGTAAGT GCGTATTCCA ATTCAGTTTT CGACCGTAAG TATGAAGAGC ACAAAAGATA CCGACATCTA TTCCTTTATC TTTTGCCCAT CCCAGCAGAA TGTTTGCAGC ACATTTGAAT AATTTATTTA ACAGCCAACG GTTATGACGA AAGATAGGCC ATAGCGTGTT TGGAAGGGTA AAGGTGATGT GTTGATATTC GCATTCAGGG AAGACATGTT GTTGCTTTTG TATCCATCGC TCTGTGGCTT TCATGCCACA GCTACTGCAC GCTCGAGATT TACAGGTTTG GTGAATATAT TTGATATGGG TACAGTCAGG GTTGCAACAA TGATATTCGC GAGAGCCAAA AGCCGCTGTC CCACAGGACA GCATCTTTGT GACATTTTCA ATCACGACCG CTCTTAGGTT AGCTTTGTTA TTATGAAGAA ATTTAAGCCA GTTATTTTGA CTATTAAATA ATTGTTTCAG GGGTTTATAT GCGTGCATGG CGATAGGATA AACGATTTAT TGGCAACAAT GGAAGAGGTT GAGTCCTTTT GATTTGCGCC GTAGGCGCCT ATTGTTCTAG ACGCGAAAGT GGATTCACTG AAAATTGAAG GTCGTATTAA AGGCGCTCAC TACGTCTATA CTGTGGTGGA AAACTGGCGT AAAAATATTA ATACGTTTAT TGAAACGGGT GAGCTATATG AAGATGACTC GAATCTACAT AAAGTCTTCA ACCGTGGTTT AACCAACAAA TTCTTAAAAG GGAATTTGAC CAAAGACATG TTTATCGATA ATCCTCGTGA TAACAGCGTA AATTACGCGG TTGATCAGAG TAACGCGATT GATGTTGTTC AAATCCAAGA AGTGAAACAA GAGCTTTACA CTGATAAAAA TGCAATCGGT GCCACTCTTG AAGAAAAAGT GAAGTCTCTA AGTATCGACA AAATTGCGAT TACGATTGCG TTTAAAGCGG TATTAGGTGA GCCACTAACG GTGATCATTA CACCAAGTAA AGACGATCAA GAAACGTTTG AAGTGAAATC TACATCACTA CTGAGCGAAG CCGGTCAAAA ATCGATCACT TCAAAAGAGC TAGAGAAGCG CTTTAAAGGT GTGATTACGC CAGATTACCT TCTTGAAGGT TACGATTTCT CAGAGCTTGG AGACAACTTA GCCGTTCCAT TCAGAGAGCT TTCTGAGCTT AAAGAGAAAG TCGCTTTCTT ATTGAATGGT TCTAAAGAAG TGATTAAACA CACAGATGTT GCGGCATTAG TACAGCAACC AAAAGTCGAA GAGAAACCGA CACTATCGAT GCTGATTTCT GATGTTGCTG ATTTGAACAT ATGTGATGTG ACTGACGCTG ACATTTACTT CAAATTACCA GAAAGCTTTA AAAAGCGTGA TAAAACATAC ATTAATATCT TCTTAGAAAA CCCTCGTTTA ATCCCATGGT TCCCTGCGGT TCTGATTGGT AAAGATTACG ACGAAGCCGT GAAAGTATTA GAAGAAGCAA AACCAACTCG TATCGTAACG AATAATACGG GTATAGCATA TAAAGCGTTT GAAATGGGGA TAGCGTGGAT CGCAGGTCCA CTACTAAACA CAACAAACTC ACATGCGTTA ATTACGATGA AAGAAGCGTT GAATTGTGCT GGTGCCTTTA TCTCAAATGA GATCAATAAA GGTCAAATTA AGCACATTCG TCGTCCTGAA AACTTCAAGT TGGTATACAG TATTTATCAT CCGATTTTGA TGATGACAAG CCGTCAATGT TTCTTCCAAC AAACCGTAGG TTGTAACAAA CCATCGATTG AAGCAGGTTG TATGTTGAAG TGTGAAAAAG CCACTACGAT TACAAACGTG AAAGGCATTT CATTTGCAGT CGATAAGCAA AAAGGCGGCT ACCCAAGTAT TTACAACCAC GAGCAATTCT TAAACATGGA TATCGTGACC GATTTATCGG ATCTGTTTGA TGAGTTCTTC ATTGATTTAA CGAACATTGG TGGTGGCTCT AAAGAACAAG CCAATAAAGT CGAATTAGTG AAACACTTTG AGAAGTTATT GAATGGCGAT ACGAGTGTGC AAGAAGAGTT GTTTACAATG GTTCCAATCA ACACTAACGA TCAATATCAA CAAGGTTTGT AA
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Protein sequence | |
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