| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1271 |
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| Symbol | |
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| ID | 6986953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1379624 |
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| End bp | 1380955 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379637 |
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| Product | putative response regulator |
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| Protein accession | YP_002262736 |
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| Protein GI | 209694808 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGTAT TTCAAAAAAT AATAATAGGA ATGCTAATCC TCTCAATTAG TGCACTTATT
TGGCATCATT TTTGGGGGGA TACTAAAACA TTAACAATTA GTCCTGAAAA ATACAGCTAT
TACGGCACTG ATGATCGCAA GGTTGGAGGG ATTAGTGAAG CAACATTAAT CGATAAAAAT
AATGTGCCAA GCATGTTGTG TAATATGAAA AAAGGGGATT ATGCTTGGCC TTATTGCGAG
GCTGCGATTC ATTTATCAGG CAGTATTTTT GAAGGTATCG ATCTCTCGGA TTATTCTACC
CTGGTACTCG ATATCGATTA TAAAAGTACC GATCCTAATG GTCGTTTACG GGTGTATTTA
CGAAACAGCA ACCCGGCATA CACTAAACGC AACGACGCGG CGTCATTAAA ATTTAATGGC
ATCGAATATG AACCTGGATT TAAAACGGGT CCAAAAGAAA TATTATTGTC GGATTTTCAA
GTATTAACGT GGTGGATTGC GGATTACAAA GTAGCCGTAG AACATGCTGC GCCTGAATTT
TCTAATGTAT CGATTATTGA AATTGCGACG TCTTCAGGCC TTAGTGTCGG TAATTTTGAA
ATGACAATTA ATAGTATTGA ACTGCGTGGT TCTTGGGTTA AAGAAACGAC CTTATTGAAA
TTTATTTTGT ATGCTTGGTT GGTCATGATC ATTGGTTACA TCCTTTATGA ACAAAAAGGG
TTAAATCGAC GTCTTAAAGC CAGTACGTAT CGTGAAACCA AATTACAAAA GATGAATGAT
AATTTAAAAG AAAAAAATGT TGAGTTTGCC GAGTTAGCAC ACCGAGATTC GTTAACCGGT
GCGAGAAATC GAAACGCAGT AAGGGATTGG TTAGACAGAA TGTCTCAACA AGTACGTTGG
GGTAAACAAC AATTCTCTGT TATCTACATT GATATTGATT TTTTTAAAGG TATTAATGAC
AAGTTAGGTC ACCAAGTTGG GGATGATATT TTACGAGAAT TTGTTTTGGT GGTGACGGGA
TCGATTAAAA CGACTGATTT CCTCGTTCGT TGGGGAGGTG AAGAGTTTAT TGTTTTTAGT
CCACAGACTG GTCTGGATCA AGCGTTTGAA AAAGCAGAGC ATATTCGACG TACTGTTGAG
CATCACCTTT GGTGTCATAA TGAATCTTTG ACGTGTAGCT TTGGTGTGGC AGAAATGGGG
AATGAGCGTA TTTCCGAAGT GATAGCAAGG GCGGATGACG CGCTATATAA AGCTAAAAAT
CAAGGGCGTA ATAGGGTGGT GAGAAGTAAT AATCTGCCCG ATCAAAGATT GGTTTCTCGT
TTTATGGATT AG
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| Protein sequence | MRVFQKIIIG MLILSISALI WHHFWGDTKT LTISPEKYSY YGTDDRKVGG ISEATLIDKN
NVPSMLCNMK KGDYAWPYCE AAIHLSGSIF EGIDLSDYST LVLDIDYKST DPNGRLRVYL
RNSNPAYTKR NDAASLKFNG IEYEPGFKTG PKEILLSDFQ VLTWWIADYK VAVEHAAPEF
SNVSIIEIAT SSGLSVGNFE MTINSIELRG SWVKETTLLK FILYAWLVMI IGYILYEQKG
LNRRLKASTY RETKLQKMND NLKEKNVEFA ELAHRDSLTG ARNRNAVRDW LDRMSQQVRW
GKQQFSVIYI DIDFFKGIND KLGHQVGDDI LREFVLVVTG SIKTTDFLVR WGGEEFIVFS
PQTGLDQAFE KAEHIRRTVE HHLWCHNESL TCSFGVAEMG NERISEVIAR ADDALYKAKN
QGRNRVVRSN NLPDQRLVSR FMD
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