Gene VSAL_I1253 details

Gene Information

• Locus tag: VSAL_I1253
• ID: 6986936
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1360921
• End bp: 1362912
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643379624
• Product: X-Pro dipeptidyl-peptidase
• Protein accession: YP_002262723
• Protein GI: 209694795
• COG category: [R] General function prediction only
• COG ID: [COG2936] Predicted acyl esterases
• TIGRFAM ID: [TIGR00976] putative hydrolase, CocE/NonD family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACAG TTAAAGAAAT TCACCATGAT TATCTTACGT TACCCGATGG TACTCGCCTT 
GCTTATCGAG CTTGGATGCC AGAAGATGCC CACACTAACC CAGTCCCTGC TATTTTAGAG 
TTTCTTCCTT ATCGAAAAAA TGACGGCACA ATCATCCGTG ATGAAATCAC CATGCCCCAA 
ACGGCTGCAC AAGGTTATGC TTGTGTGCGA GTCGATTTAA GAGGGTGTGG AGAATCTGAA 
GGTTTCATGA CGGATGAGTA TTCCACTCAA GAATTACAAG ATGGCTGTGA TGTGATCACT 
TGGATTGCTG CTCAAGCGTG GTGTAACGGT AATCTTGGTA TGGTGGGGAT TTCGTGGGGT 
GGCTTTAATT CTTTACAAGT CGCCGCGTTA AATCCACCTG CTTTAAAAGC AATCATCACC 
CAGTGTTCAA CGGACGACCG CTATCGTGAT GACATTCATT TTAATGGTGG CTGTCTATTA 
AATGACAACA TGGATTGGGC TGCGTTTTTT TGGGCTTACG CGCAAGGTCG CTCGCCGGAC 
AAGGCGCTTG TTGGGGAAAA CTGGAAAGAA ATTTGGCTAG AGCGATTAGA AAATATGCCT 
TTTTTAGCCA AGCCTTGGTT AACAGAGCAA ATACGTAATG ACTATTGGAA ACACGGTTCG 
GTGTGTGAAA AATATTCTGA TATTAAGATC CCAGTATATG CAATGGGAGG CTGGGCTGAT 
GGTTATCGTA ATACCGTATT TACTTTGCTT CAGAATCTTG ATGTTCCGAC AAAAGGGTTA 
GTGGGACCTT GGGCGCATAA ATACCCCAAT ATCGCGTTTC CTAATCCTAA AATGGATTAC 
GTAAAAGAAT CGGTACGTTG GTGGGATCGC TGGCTTAAAG GTATCGATAA CGGAATTATG 
GATGAGCCTA AACTCAATTA TTATTTACAA GACAGTGTGA CGCCGGCAAC GGATTATGAC 
ACTCGTCCAG GGAAGTGGGT ATCGGAACCT GATTGGCCCT CTGACAATAC GCAATATCAA 
ATTTGGCATC TATCGGATAG TGGATTGAAA ACCACGGCAA GTGAATCGGA TACGATGAGT 
ATTTGCTCAC CACAAACGGT TGGGCTTGAT GGTGGCCGCT TTTGCGCGGG CATTCGATTA 
GATATGGAGC ATCCTGCGGA TCAACGTATA GATGACTCTG GATCATTGGT GTTTGATTCT 
CTGATATTAG AGCAAGAGGT ATCGATTGCA GGCCAAGTGC TCGCTAATCT CAATTTGTCG 
AGTGATAAAC CTCAAGCGAG TGTGATTGTT CGAATTTCTG ATGTACATCC TAATGGGCAA 
GTAACAAAAG TCAGCCATGG TATTTTAAAT TTGACTCATA GAGACAGTCA TGAGTTTCCC 
CAAGCGTTAA ATCCTGATGA AAGGTATGAC ATTGAAATAA AAGTAAATCA CATGGCGTAT 
GTTATCCCTA AAGGGCATAA AATTCGTATT GCGATTTCGA CCGCTTACTG GCCTCTTATT 
TGGCCGACAG CAGATAATGC AACACTGACT GTTTACCCAC AACACAGTTC GATTACTTTG 
CCAGTTAATG CTCAACCAAT ATGTTCAAAA TCAGTACCAG AGCACAATAA AACCGTTTCG 
TTTAACGGTA AGATATTAAG ACCGTCAGAC AGTAAACGGG TGACTCATCG GGACTACAAA 
ACCGGGGTCG TAACGCTTGA AACTATGGAG GATTTTGGAC GACAATTTTA TGAATCATCA 
CAAAGTGAAA TCGATTTTAT TATTCATCAA GAACTGAGCA TTCATCCTGA TGATCCTTTG 
AGTGCCAAAA ATGATATCCG ATTGAAAGTG GATATGGGAC GTGAAGGGTG GTGGACAGGG 
ATTGAATGCC ATTATGAAAT GATTTGTGAC CATGATTATT TTTATATCAC AGCAAACTGG 
AAAGCTTTTT ATGACAATGA TGTCGTTTTT GAAAAGCAGT TTACAGAAAC TATCAAGCGT 
CACTTTATGT AA 

 

Protein sequence

MNTVKEIHHD YLTLPDGTRL AYRAWMPEDA HTNPVPAILE FLPYRKNDGT IIRDEITMPQ 
TAAQGYACVR VDLRGCGESE GFMTDEYSTQ ELQDGCDVIT WIAAQAWCNG NLGMVGISWG 
GFNSLQVAAL NPPALKAIIT QCSTDDRYRD DIHFNGGCLL NDNMDWAAFF WAYAQGRSPD 
KALVGENWKE IWLERLENMP FLAKPWLTEQ IRNDYWKHGS VCEKYSDIKI PVYAMGGWAD 
GYRNTVFTLL QNLDVPTKGL VGPWAHKYPN IAFPNPKMDY VKESVRWWDR WLKGIDNGIM 
DEPKLNYYLQ DSVTPATDYD TRPGKWVSEP DWPSDNTQYQ IWHLSDSGLK TTASESDTMS 
ICSPQTVGLD GGRFCAGIRL DMEHPADQRI DDSGSLVFDS LILEQEVSIA GQVLANLNLS 
SDKPQASVIV RISDVHPNGQ VTKVSHGILN LTHRDSHEFP QALNPDERYD IEIKVNHMAY 
VIPKGHKIRI AISTAYWPLI WPTADNATLT VYPQHSSITL PVNAQPICSK SVPEHNKTVS 
FNGKILRPSD SKRVTHRDYK TGVVTLETME DFGRQFYESS QSEIDFIIHQ ELSIHPDDPL 
SAKNDIRLKV DMGREGWWTG IECHYEMICD HDYFYITANW KAFYDNDVVF EKQFTETIKR 
HFM