| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1224 |
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| Symbol | |
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| ID | 6986911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1333119 |
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| End bp | 1334027 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379597 |
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| Product | hypothetical protein |
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| Protein accession | YP_002262696 |
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| Protein GI | 209694768 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0204898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGAAAA TCACAATTGT AAATTTGGTT TTAGAACCCG CGACAAGAAG GTTAAGTAAT
AATGCGGATG ATGCAATCAT ACTTAGGCCT TTGCCTTATA ACGTCTTCAC ATTATTGTTA
GAGCAAAAAG GAAATTGCAT CGATCGTGAT GAACTGTTTG ATGTTTGTTG GGAAGGGGCG
ATTGTTACCG ATCAAGCCTT AACGAATGTT ATCTCCGGAT TAAGACGTAA TCTTATCCAA
TTAGAGGCAG AAGGCATTGC GATAAAAACC GTTAGTAAAG TAGGGTATTT ACTGACCGTA
GATGAAACCG TCGTTATGCA ACCGGTAATT GAACCCAAAA TTATACCGCC AGTTATTGAT
AATATCGAAC CGAAAGCCGT TTTGGTGTCT CCTCAAGCTG AGGACCCCTT AAGGGTTCAT
GATAATGTCG CAATCAGTAA CGATGTGCAG GTGTTGCCGA CGACTGAAGT TGGTCGTTCT
CGCGTGCGAT TATTAACAAA GCCTTCTTTG AAATCGGCAT TAATCGCCTT TTGTTTATGC
TCACTAATCG CTGCTGTGTG CTGGTATGAG AAAGCATCGT CTGTTCCTTA TTTTTTAGTG
AAAGAAAATT ACAATCATTT TGAGATAAAA AATACAGATT TCTACATACT CAATAACACA
AGAGGTAAAG ATAATATTGA GGCGATTCAA TCGGGTCTTG AGTCTTTAAA TTTAGTTGAG
TGTAATGCTG AAATTTATAT CCGTATGTAT GACTCTGTGT ACGATGACGA TACTTACTCA
TTGAAAGGGT ATATTGTTGC AAAAAACAGC AACCGAAATA GCAATTATTC ATTAAGTAAG
TTTTCACATG AAAATTTACC GACCATTATT GCGAACGGCC TAAAAAGAGC GAAATTAATA
TGCGAATAG
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| Protein sequence | MQKITIVNLV LEPATRRLSN NADDAIILRP LPYNVFTLLL EQKGNCIDRD ELFDVCWEGA
IVTDQALTNV ISGLRRNLIQ LEAEGIAIKT VSKVGYLLTV DETVVMQPVI EPKIIPPVID
NIEPKAVLVS PQAEDPLRVH DNVAISNDVQ VLPTTEVGRS RVRLLTKPSL KSALIAFCLC
SLIAAVCWYE KASSVPYFLV KENYNHFEIK NTDFYILNNT RGKDNIEAIQ SGLESLNLVE
CNAEIYIRMY DSVYDDDTYS LKGYIVAKNS NRNSNYSLSK FSHENLPTII ANGLKRAKLI
CE
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