| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1223 |
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| Symbol | |
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| ID | 6986910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1332155 |
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| End bp | 1332745 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379596 |
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| Product | outer membrane protein A precursor |
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| Protein accession | YP_002262695 |
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| Protein GI | 209694767 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000983435 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC CGATACTATT ATTAGCGTTA CTGTCTGCTT GTTCATACGC AAATGCCGCA
GCAAATGATG TCTCTGGCGT TTACTTAGGC GGTGGTTTTG GTACGACTGA TTTTGATGAT
GATGGTGGCT TTGGTTCAGC TAACATTAAT GATAATGACT CTACCTTTAA ATTAATTGGT
GGCTACCAGT TTAACCGCAT TGTTGCAGTA GAAATGCAAT ATACAAAATA CGGTGATTTA
AAACTTACCC ATTATAACTC TCCTATTAAC GGAACCGTTG AGCATTCTTC TGTATCACTT
GCCGCAAACG TAGGTTATAC CTTTGGCAGC GGTTGGAGAC CATTTGCTAT TGCTGGCCTA
GGTTCAATAG AACAATCAGG AAAAGCATAC GGACTTTCTG ATAGCGATAG CGGTACTTCT
TTCCACTATG GTGCAGGTGT TGAATATACA CCTAAAACAT TAGGTGGCCT TGCCTTCCGT
GTTGCTTATG AAGGCGACCT CTTTGTTGTT GATTCTGGCA GTAATAATAT CGATGATGAT
TACGCAATGA CAATTGGTAC ATTGTACGCT GGCGCAACTT ACAAATTCTA A
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| Protein sequence | MKKPILLLAL LSACSYANAA ANDVSGVYLG GGFGTTDFDD DGGFGSANIN DNDSTFKLIG
GYQFNRIVAV EMQYTKYGDL KLTHYNSPIN GTVEHSSVSL AANVGYTFGS GWRPFAIAGL
GSIEQSGKAY GLSDSDSGTS FHYGAGVEYT PKTLGGLAFR VAYEGDLFVV DSGSNNIDDD
YAMTIGTLYA GATYKF
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