Gene VSAL_I1213 details

Gene Information

• Locus tag: VSAL_I1213
• ID: 6986901
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 1322229
• End bp: 1322831
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643379587
• Product: transporter, LysE family
• Protein accession: YP_002262686
• Protein GI: 209694758
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTTAT TTTTAGCAAT GGCAATGTTT GCACTCATCA CCTCCCTCTC TCCTGGGCCG 
GTAAATATTC TCGCTACCAT TACTGGTGCT AATCATGGGT ATGTAAAAAC CATTCCCCAT 
ATTTTTGGTG CTACTGTTGG GTTTGTCTCT ATTCTTATCC TATTAGGATT AGGGCTGATA 
CAAGTCTTAG ATAATTCCCA TACTGCAACA TCCATTTTAA ATTACTTTGG AAGCACTTTT 
CTGCTTTATT TGGCTTATAA AGTAGCGACG AGCGATAGAG CAGACCAAGA TAGAGATAAT 
AAAGGCAATG CTCCAACGAT GGTGCAAGGC TTATTGTGTC AATGGTTAAA CCCAAAAGCT 
TGGATTGTGT CTTTATCTGG CGTGACCGTA TTTTCGAGTA ACGGTGTGAT TCCTCTCGAA 
GATCTTGGAG CGTTTAGTAT GATATTTTTT ATCGTATGTT ACTGCTGTAT ATCGACGTGG 
GCATTACTCG GGTTAACGAT TGGACGATAT TTAGAGCACC CTGTTCATTA TAAAATCTTT 
AATCGACTTA TGGGATCATT GCTCGCATTA ACCGTCGTTT ATGTCTTCTT TATATCAAAT 
TAA 

 

Protein sequence

MTLFLAMAMF ALITSLSPGP VNILATITGA NHGYVKTIPH IFGATVGFVS ILILLGLGLI 
QVLDNSHTAT SILNYFGSTF LLYLAYKVAT SDRADQDRDN KGNAPTMVQG LLCQWLNPKA 
WIVSLSGVTV FSSNGVIPLE DLGAFSMIFF IVCYCCISTW ALLGLTIGRY LEHPVHYKIF 
NRLMGSLLAL TVVYVFFISN