Gene VSAL_I1150 details

Gene Information

• Locus tag: VSAL_I1150
• Symbol: trpB
• ID: 6989326
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 1250696
• End bp: 1251886
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643379528
• Product: tryptophan synthase subunit beta
• Protein accession: YP_002262627
• Protein GI: 209694699
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0133] Tryptophan synthase beta chain
• TIGRFAM ID: [TIGR00263] tryptophan synthase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAT TAGATGCCTA CTTCGGCGAA TATGGTGGTC AATACGTACC ACAAATTTTA 
GTTCCTGCAC TTGATCAACT TGAGCAAGCC TTTATTGATG CTCAAGCAGA CGAAGATTTC 
CGTGCCGAGT TCATGACACT ATTGCAAGAA TATGCGGGTC GCCCTACCGC TCTTACCCTT 
TGTCGTAACC TAACTAAGGG TACTAAAACT AAGTTATACC TAAAACGTGA AGATTTACTG 
CACGGTGGCG CGCACAAAAC CAATCAAGTA TTGGGTCAAG CACTGCTCGC TTTACGTATG 
GGTAAAAAAG AAATCATCGC TGAAACAGGT GCCGGTCAAC ACGGTGTAGC AACGGCTCTT 
GCCTGCGCAT TGCTTGGCTT AAAATGCCGC GTTTACATGG GTGCTAAAGA TATTGAACGT 
CAAAGCCCGA ATGTATTCCG CATGGAATTA ATGGGCGCAG AAGTGATCCC CGTTCATTCA 
GGTTCAGCAA CACTAAAAGA TGCCTGTAAT GAAGCATTGC GTGATTGGTC TGCAACGTAT 
GAAACTGCCC ACTACCTATT GGGCACTGCT GCGGGTCCTC ACCCATTCCC AACCATCGTT 
CGCGAATTCC AACGCATGAT TGGCGAAGAA ACTAAAATGC AAATCCTTGC TCGTGAAGGT 
CGCCTTCCTG ATGCCGTAAT TGCTTGTGTC GGTGGCGGCT CAAATGCAAT AGGTATGTTT 
GCGGATTTCA TCAAAGAAGA AAATGTAAGA CTGATTGGTG TCGAACCCGC AGGTAAAGGC 
ATTGATACCG ACCAACACGG GGCACCATTA AAACATGGAA AAACCGGTAT TTTCTTTGGT 
ATGAAAGCGC CATTAATGCA AGATGAACAC GGTCAAATTG AAGAATCTTA TTCTGTTTCT 
GCGGGTCTTG ATTTTCCATC AGTTGGTCCA CAACACGCTC ACTTGAATTC GATTGGCCGT 
GCTGAATACG GCTCAGTAAC CGATGATGAA GCACTCGAAG CATTTCAAAT ATTAGCAAAA 
GGCGAAGGCA TTATTCCGGC ACTGGAGTCT TCTCATGCGC TTGCTTATGC ATTACAAATG 
GCACATTCAG AGCCAGAAAA AGAACAACTA TTAGTGGTAA ACCTATCTGG TCGTGGTGAT 
AAAGACATTT TCACCGTTCA TGACATCCTA AAAGAAAAGG GAGAAATCTA A 

 

Protein sequence

MAKLDAYFGE YGGQYVPQIL VPALDQLEQA FIDAQADEDF RAEFMTLLQE YAGRPTALTL 
CRNLTKGTKT KLYLKREDLL HGGAHKTNQV LGQALLALRM GKKEIIAETG AGQHGVATAL 
ACALLGLKCR VYMGAKDIER QSPNVFRMEL MGAEVIPVHS GSATLKDACN EALRDWSATY 
ETAHYLLGTA AGPHPFPTIV REFQRMIGEE TKMQILAREG RLPDAVIACV GGGSNAIGMF 
ADFIKEENVR LIGVEPAGKG IDTDQHGAPL KHGKTGIFFG MKAPLMQDEH GQIEESYSVS 
AGLDFPSVGP QHAHLNSIGR AEYGSVTDDE ALEAFQILAK GEGIIPALES SHALAYALQM 
AHSEPEKEQL LVVNLSGRGD KDIFTVHDIL KEKGEI