Gene VSAL_I1137 details

Gene Information

• Locus tag: VSAL_I1137
• Symbol: hisH
• ID: 6988661
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1240890
• End bp: 1241504
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643379516
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_002262615
• Protein GI: 209694687
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAGC AAAATGTCGT TATTATTGAT ACAGGCTGCT CTAACGTATC GTCAGTGAGA 
TTTGCGATTG AGCGTTTGGG TTATGACGTT ACGATAAGCA GAGATCCACA AGTGGTATTA 
GCAGCAGATA AGCTGTTTTT ACCGGGCGTT GGCACAGCAA GCGAAGCGAT GAAAAACTTG 
GCTGAACGAG ATCTCATTGA ATTGGTTAAA CAAGTTGAGA AGCCACTGTT GGGTATCTGT 
TTAGGTATGC AACTTTTGGG TAAGCTTTCT GAAGAGAAAG GCCAAAAAGC AGATCAAATT 
GTAGATTGTT TAGGCTTATG TGACGGTGAA GTTCGTAAGC TTCAAACGGG TGATTTACCG 
CTGCCTCACA TGGGTTGGAA TACGATTAAG CCTATTGAAG GTAATCCGCT GTTTAAAGAC 
ATTCCAGAGA ACAGTTACTT TTACTTCGTA CACAGCTTTG GCATGCAAGT GGGTGATTAT 
ACCATTGCGA CTTGTGACTA TGGACAACCA TTTACTGCGG CATTACAAGT GGGTAATTAT 
TACGGTGTTC AGTTTCACCC TGAGCGTTCA AGTAAAGTGG GTTCAACGCT TATTCAGAAC 
TTTTTGGAGT TATAA 

 

Protein sequence

MTKQNVVIID TGCSNVSSVR FAIERLGYDV TISRDPQVVL AADKLFLPGV GTASEAMKNL 
AERDLIELVK QVEKPLLGIC LGMQLLGKLS EEKGQKADQI VDCLGLCDGE VRKLQTGDLP 
LPHMGWNTIK PIEGNPLFKD IPENSYFYFV HSFGMQVGDY TIATCDYGQP FTAALQVGNY 
YGVQFHPERS SKVGSTLIQN FLEL