| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1088 |
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| Symbol | |
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| ID | 6989085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1183346 |
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| End bp | 1183906 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379475 |
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| Product | integral membrane protein |
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| Protein accession | YP_002262575 |
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| Protein GI | 209694647 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTAAAT TACTATTACC TATTTTAGCT GTGCTTGCTC TAGCTCAACT AAACGTAATT
TCTGGCTATC TTGTATGGGA TAAGAGTTTA ATCATCAATG GTGAGCTTTG GCGGCTTGTT
ACAGGTAACT TTACACACAC TAACCTCCCC CATTTATTGA TGAACAGTGC CGCACTATGT
ATTTTTAGCG TCATCTTTAA AGATTATCTA AATACAAAGA AACTGTGGGG ATTATTGCTT
GCCCTCAGTG TTATGGTTGG TTCACTTTTA CTTCTCTCAC CAATTGAACG CTACGTAGGT
TTATCTGGCG TATTGCATGG GCTCTTTGTT TGGGCTGCCA TCGAAGACAT TAAGCACAAA
CGTTATACTG GTTGGCTTCT CTTACTGGGC GTTCTCGCTA AAATAGGTTG GGAGCAACTA
TTTGGAGCAA GCGCATCCAC GATTTCCCTA ATTAACGCCA GTGTCGCAAC AGACGCTCAT
TTATTTGGAG CACTCAGTGG TGGAATGCTC CAATTATGTG TCTTTTTAGT GGCTAATAAA
GCTTCTGACG ACCCAAAATA G
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| Protein sequence | MIKLLLPILA VLALAQLNVI SGYLVWDKSL IINGELWRLV TGNFTHTNLP HLLMNSAALC
IFSVIFKDYL NTKKLWGLLL ALSVMVGSLL LLSPIERYVG LSGVLHGLFV WAAIEDIKHK
RYTGWLLLLG VLAKIGWEQL FGASASTISL INASVATDAH LFGALSGGML QLCVFLVANK
ASDDPK
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