| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1041 |
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| Symbol | |
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| ID | 6986810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1132788 |
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| End bp | 1134902 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643379426 |
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| Product | probable tail length determinator |
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| Protein accession | YP_002262529 |
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| Protein GI | 209694601 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5280] Phage-related minor tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCC ACCTAGACAA ATTGATGATG CAAGTTGCAT TGATTGATAG TGTCACCAAA
CCGCTAAAAG GGATCCAGAA TACGGTGACC GAAACAGCGG ATGTTGGCCG TTCAGGTTGG
GAAAAAATGG CAGGTGGTAC GGCTGGCGTG ATTGCAGCAG GTTTTGCTGT TCAACAGGCG
TTAATGCCAG CCATTGAAAT GGATAGGGTG CTTGGTGAAG TTAAATCGCT TGGTGTGGTT
GATGAAGATT TACAGCAACT TCAAAAAACC GCATTAGCCT TTTCGGTTGA GTATGGAAAG
TCAGCACAAG AAGTGGTTGG TGCGGCCTAT GACATCAAAT CGGCTTTCGG GGATATTACT
GGACCAGAGT TATCTGATAT TACCAAAAGC TCTGCCGTTC TTGCTGCAGC AACTAAAGCG
GATACAGCAA CCATAACTGA TTATATGGGC ACCATGTATG GGGTGTTTAA GAATCAGGCC
AATGACATGG GTGTGGGCAT TTGGTCAAAG AACGTAGCAG GCATGACGGC TCAATCTGTG
GAGATGTTTA AAACAACGGG TAAAGGCATG AGTGATGCGT TTACCAGTGT TGGAGCAAAC
GCAACCGCTG CAGGTATCAA GATGAATGAG CAGATGGCTA TTCTTGGTAC GTTGCAATCC
ACGATGTCAG GCAGTGAAGC CGGTACTAAA TATAAATCGT TCTTGACTGG TGTTGGTGGC
GCACAAGACA AACTGAACAT GAAGTTTGTT GATAGCCAGG GCGCAATGCT GCCAATGGTG
GATATTCTCA ATAAATTAAA AGGTCAGTTT GGCGACACGC TTGATGTGGC AGAAAGTGAC
GCATTAAAGA AAGCATTTGG CTCAGATGAG GCCGTCAGCA TGATCAAGTT ATTGATGGCT
GATACTAACG GATTAGCAAG TAGCATTAAC TCTCTTGGTA ATGTGAAAGG CATGAGCAAA
GCCGAGAATA TGGCTGGTGC TATGACTGAC CAATGGCAAC GACTTGAAGC CGCATGGTTT
GCGATCCGTG CCGGAGCGTT TGGGTTAATT CTTCCATCTA TTAATGCTAT TGCTGGTTCA
ATGGCCGATG GTTTTAATGT GCTGCTTGGT TGGACTCAAG AGCTTCCTGT ATTAACGCAA
TACCTTGGTT ATTTCGCCTT AACAATAGTG GCTGGTGCTG GGTTAATTGC GGCATGGAAT
ATGGTTGTCG GTTTGGCATC TTTGATGAGT GCCGGATGGT CTAGCGCCAC GTTATTACTC
ACAACAGTCA TGAAAGGCTT TAATTTAGTG ATGAGAATGG CACGTTTTGC AGCTCTTGGA
TTTGCGATGG CTGCAGCAGT GGCACAAGTT CCATTACTGC CCTTAATTCT TGGTATTGGT
GCCGTGGTTG CGGCAGTCGG TGCGGTGATT TATTTCTGGG ATGATTTAAA AGCGGCGTGG
AGCGATTTTT CATTCATTGA ATCTCTAGGC TCAATGGTGG ATTGGTTAAT TGAGAAAATT
AACTTAATAC CAGGCATAAA TATTGGCGGT GAAAGTTCGG GCATTCCTCA AATGGATACG
CTTGAATTAA GCACAGCAAC ACCAACGCAT TACGCCTCAA AAGCAGCAGT GCCGGATTAC
AGTTATGGGT ATCAAGCGCC AGTGACTCAA GAGGTCGCAG TTACTCCAAA TGTTACAGAG
CCTGTGATCC CGAAAGTGTC TGAACAAAGT GTTAACTATG GCTCTCAATA TTCAGGGTTG
AATACCGTAC CAAGCTATCA AGGTAATGTG TATTACCAGA ATCAAATACC AGTACAACCA
GAGTCATCTG ATCTGATTAT AGGCTCGGTG GTTGCTCAGC CAGAGGTTCC AGAAGTGAAT
GGTATTGTTA CTTATGACGG AGCTATTCCA CCATTAACTG ATACGGATAA GAGTAAAGAG
ATGTCGGCAC CAATTTCAGC TTACATCGGT GGAAATGCAG AAGGTAAAGC TAATGTGTCT
CAGCAATTAA AACAGATGTC TGCAGGCAGT ACCGATAATA GCCGAACGCA GCATGTTGGC
GATGTGTATA TCACTCAAGA GCAAGCCTTT ACGCCAGAAG ATTTATCAGC ATGGAATGAG
ATGAGTACCC CATGA
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| Protein sequence | MSAHLDKLMM QVALIDSVTK PLKGIQNTVT ETADVGRSGW EKMAGGTAGV IAAGFAVQQA
LMPAIEMDRV LGEVKSLGVV DEDLQQLQKT ALAFSVEYGK SAQEVVGAAY DIKSAFGDIT
GPELSDITKS SAVLAAATKA DTATITDYMG TMYGVFKNQA NDMGVGIWSK NVAGMTAQSV
EMFKTTGKGM SDAFTSVGAN ATAAGIKMNE QMAILGTLQS TMSGSEAGTK YKSFLTGVGG
AQDKLNMKFV DSQGAMLPMV DILNKLKGQF GDTLDVAESD ALKKAFGSDE AVSMIKLLMA
DTNGLASSIN SLGNVKGMSK AENMAGAMTD QWQRLEAAWF AIRAGAFGLI LPSINAIAGS
MADGFNVLLG WTQELPVLTQ YLGYFALTIV AGAGLIAAWN MVVGLASLMS AGWSSATLLL
TTVMKGFNLV MRMARFAALG FAMAAAVAQV PLLPLILGIG AVVAAVGAVI YFWDDLKAAW
SDFSFIESLG SMVDWLIEKI NLIPGINIGG ESSGIPQMDT LELSTATPTH YASKAAVPDY
SYGYQAPVTQ EVAVTPNVTE PVIPKVSEQS VNYGSQYSGL NTVPSYQGNV YYQNQIPVQP
ESSDLIIGSV VAQPEVPEVN GIVTYDGAIP PLTDTDKSKE MSAPISAYIG GNAEGKANVS
QQLKQMSAGS TDNSRTQHVG DVYITQEQAF TPEDLSAWNE MSTP
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