| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1028 |
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| Symbol | |
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| ID | 6986797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1125729 |
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| End bp | 1126739 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643379414 |
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| Product | major capsid protein |
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| Protein accession | YP_002262517 |
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| Protein GI | 209694589 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01551] phage major capsid protein, P2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAA CTCAAGTCGC TCGCGCACTG TTAGATGAAT ATTGTGCAAA GCAATGTGAA
GTATTTAAAT GCCCTGATGT AAGTAAGCAA TTTTCTATAT CGGGTCCAAT TGAAACGCAG
CTAAAAAGTA AGTTAATGGA ATCGGTTGAT TTCTTAAAAC TTATCACGGT TGAAGATGTA
GACCAAAAAA CAGGCCAAGT TATTGAAGTG GGTACCAATA AACTTCATAC AGGTCGTAAA
AAAGGTGGTC GCCACACTAC ATCTGGCTCA GTGGATGGTA ATACCTATAC CTTGGTAGAG
ACTGATTCAT GTGCTGTCGC ATCGTGGGAT TTATTAAGCG TATGGGCGAA CTCGGGCAAG
CCGGGCGAGT TCATGAAGCG TTTAAATGAA AACGCAATTC TTAATTTTGC TCAAGACATT
CTTCGTGTTG GTTTTAATGG TACTTCGGTA GCAGAAACGA CTAATCCAAC AACATCGCCA
AACGGTGAAG ACATTAACAA GGGTTGGAAC CAACTGGTGT TAGACAAATC ACCAGAGCAA
ATCATCGATG TTGATGTGTA TTTAGACCCA GACGGAAAAG GTGATTATCG AAATTTAGAT
GCAATGGCAT CTGATTTAAT CAACACCAAG ATCCACCCTG CATTACGTAA TGACCCAAGT
TTGGTCGTAT TGGTGGGCGC TGATTTACTT TCGTTTGAAC AAGCGCGTTT ATATGACGCC
GCAACAACCC CAACAGAGAA AAAAGCAGCA CAACAGTTGC CTAACTCTAT TGCTGGTCGT
CGTGCAATGT CGCCTCCGTT CTTCCCTGGT ATGCGAATGA CAGTGACAAC GTTGAAAAAC
CTGCATGTCT ACACGCAGAA AAACACACGT CACCGTAAGT CTGAACATGC AGAAGATCGT
AAACAACATG AAAACTCATA CCTACGTTAC GAAGGTTATG CCGTGGGCGC TCATGAAGGT
TATGCAGGTT TTAACGAAGC AAAAGTGCAT TTCGGTGCTA CCCCTGCTTA A
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| Protein sequence | MQLTQVARAL LDEYCAKQCE VFKCPDVSKQ FSISGPIETQ LKSKLMESVD FLKLITVEDV
DQKTGQVIEV GTNKLHTGRK KGGRHTTSGS VDGNTYTLVE TDSCAVASWD LLSVWANSGK
PGEFMKRLNE NAILNFAQDI LRVGFNGTSV AETTNPTTSP NGEDINKGWN QLVLDKSPEQ
IIDVDVYLDP DGKGDYRNLD AMASDLINTK IHPALRNDPS LVVLVGADLL SFEQARLYDA
ATTPTEKKAA QQLPNSIAGR RAMSPPFFPG MRMTVTTLKN LHVYTQKNTR HRKSEHAEDR
KQHENSYLRY EGYAVGAHEG YAGFNEAKVH FGATPA
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