Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1024 |
Symbol | |
ID | 6986793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1121338 |
End bp | 1121802 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643379410 |
Product | phage zinc-binding transcriptional activator |
Protein accession | YP_002262513 |
Protein GI | 209694585 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTTTGT CAGTCAGAGA GGTGTTTATG CGAGTTTTAT GTCAGTGTGG TACTGCGGCT ATCGTTAGCC GAAATAATAT TACCGAAGCG GTTTGTGAAT TATCTTGCTC TTGTAAAGAT GCCGAATGCG GCCATTCTTT TATTACGTCT ATTTGCTATA AGCATACGTT AGTGCATTCA CACATTGAAT TGCATAACGG GGCAACAATG GAAGGGAATC GAATTCGTTG CGGATGTGGA GAACGCGCAG TCATTAAGAA AACAAATCGT CTTTCTTATG ACTGCGCTGA TTTATATTGC GAGTGTAAAA ATACAAATTG TAAGCATCAA TTTGTTATGT CTTTATATTA TAGTCACACC CTAAGCCCAT CAGCTAAAAC AACTGATACT TTGGTATACT CATTGATTAA AGCACTGCCC CCTCAAACAA GACATGACCT TGGTCGCCAA CTCTCTATGT TTTAG
|
Protein sequence | MVLSVREVFM RVLCQCGTAA IVSRNNITEA VCELSCSCKD AECGHSFITS ICYKHTLVHS HIELHNGATM EGNRIRCGCG ERAVIKKTNR LSYDCADLYC ECKNTNCKHQ FVMSLYYSHT LSPSAKTTDT LVYSLIKALP PQTRHDLGRQ LSMF
|
| |