Gene VSAL_I0989 details

Gene Information

• Locus tag: VSAL_I0989
• ID: 6988675
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 1091774
• End bp: 1092406
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643379377
• Product: rare lipoprotein B precursor
• Protein accession: YP_002262480
• Protein GI: 209694552
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2980] Rare lipoprotein B

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.193759
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGGGAGT TCTCGGTGAA ACGACTTTTA TCTCTATTTT CAATCCGCGC AGTCATCATT 
ATTGCTCTTT CTATTATGAC CTCAGCTTGC GGTTTCCAGT TACGTGGTAG CTATTTACTT 
CCAGAAGAAG TTCATGAGGT ATCATTAACG AGTTTTGACC AATACAGTAA TTTAACCCGT 
GATGTTCAAA AACAACTGAG AATGAATGGG GTTAAACAAG TTGCACCGAC AACGGTAACG 
CCTACGCTCA ACCTGATCAG CGAAACAACA AGTGAGCGTA CGCTTTCACT TTATCAAAAT 
AGCCGTGCGG CAGAAATAGA ACTGACTTAT ACGGTTCAAT ACAGTGTTCT TATTCCTGGC 
CATGATTTAA AAACCTATAC CACCACCGTA AATCGTAACT ATCTTGATAA CCCATTAACT 
GCATTAGCCA AATCAGTTGA ACGAGACATG ATTGAAGATG AAATGCGAAC TCAAGCCGCA 
GAACAAATTC TACGTCAAAT GGCGCGTTTA AAAGCAGATG GCGAATTATT AGATGATACT 
GATATTATTA GCAACAAAGA CGAAACAGAA ACTAAAGTAA CAACAAAAGA GATGGCTCAA 
AGTATGGCTA CCTCTACAGA TAATAAAAAA TAA 

 

Protein sequence

MREFSVKRLL SLFSIRAVII IALSIMTSAC GFQLRGSYLL PEEVHEVSLT SFDQYSNLTR 
DVQKQLRMNG VKQVAPTTVT PTLNLISETT SERTLSLYQN SRAAEIELTY TVQYSVLIPG 
HDLKTYTTTV NRNYLDNPLT ALAKSVERDM IEDEMRTQAA EQILRQMARL KADGELLDDT 
DIISNKDETE TKVTTKEMAQ SMATSTDNKK