| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0869 |
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| Symbol | |
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| ID | 6988422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 969878 |
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| End bp | 971758 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379270 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_002262373 |
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| Protein GI | 209694445 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTAAGC CAAAAAGAAT AAATAATAGG AAGGAATCTA TGACAATAAA AAATAAAATG
ACGTTATTTT CGGCATCTGC AGCGTTATTT AGCGTCGGAC TTTTTTCTGC TGAATTACCG
ACAAATTTAG AATGGAAAAC GAATGATTTA GCGCCGACGT TTGCTTCACC AGAGGCCGTG
TTTGGTGGCA CTTATCGTAC GTATTCGTTG AGTTTTCCGC AGACATTTCG CTCGGTTGGT
CCCGATTCAA ATGGTGCTTT TCGTTCTTGG ATTGTAGAGG CCAATTTACC GCCGTTAATT
CAACACCCAA ATACGGGTGA GTGGCTGCCT GGCTTGGCGA CATCGTGGGC GTTTGGTGAC
GATAATAAAA CGATGTATTT CAAATTAAAT CCAAAAGCAA CATGGAGTGA TGGAAAGCCG
GTAACCGCGG ATGATTACCA ATTCATGCTA ACGTTAATGC GCTCAAAAGA CATTGTCGCG
CCGTGGTATA ACGATTTTTT TACCAATGAA ATCGCCGATG TTATTTCTTA TGACGCTCAT
ACGATTGGGG TTGTTTCAGC CAAAGAACGT AATCGTGATG AGTTGATTCA ATATACTAAT
TTAATGCCCC GTCCAGCGCA TTTCTATGGC AAACCAAAAC TCGATGAAAA CAACGATGGT
ATTGACGATA AATTTGTTCG TAAATATAAC TTTAAACCAG AACCAGTTAC AGGACCTTAT
TACATCGATA AAATCAGAAA AGGAAAAAAT ATTGTTTTTA AACATGTGGG TGAAGATTGG
TGGGGCTATG AAAATAAATA CAATCAGAAT CGCTACAACG TAGAGAAAAT CAATATCAAA
GTGATCCGTG ATGATGACAT AGCATTAAAG CATTTTGAAA AAGGAAATTT AGATTCTTTT
ACGTTACTTC GTCCCGATTT ATGGCATGAG AAATCGAACG GTAAAAACTA TCAAAATGGG
TATATTCAGA AGGCCTGGGT ATATAACCAA GCCCCTGTTG GTGCGGGTGG GTTATGGCTA
AACACAGCAA AACCGATGCT GAATGACATG AACATTCGTA AAGGCATTAT GTATGCCACC
GATTTTGACA TGATGATCGC CAAAGTGTTG AGAGGGGACT ATTCACGTAA ACCCAATGGG
ATGGGATTTG GTCATATTGG CTACGATAAT ACCACCATCA ATGCACCTAC ATTTGATGCG
AAAAAAGCCA TCGAATATTT TGAGAAAGCC GGATTTGAAA AAATAGGCCC TGATGGCATT
CGAATAAACG CCAAGGGTGA ACGACTCAGT TTCGCCATCA CGTATTCCGC TCAAGCTCAT
ACTCCTCGAA TTGCGGTATT ACGTGAACAA GCCAAGCTTG CTGGAGTCGA TTTTGAGTTA
AACCTGATCG ATGGTTCAAG CATGTTTAAA TACGTACTTG AGAAGAAGCA CGACATTTCT
TTTCATAATA TGGGAACCAG TGAGATCCCT GCGTATTGGG AATATTTTCA TTCAGACAAT
GCAAATAAAC CGCAAACCAA TCATTTTACT AATTTTACGT CACCTGAACT GGATACCTTA
ATCGATTCAT TTAAAAACGA ATTTGATATT GATAAAAAAC AGGCATTGTC TCGCGAAATT
CAACAAGCGA TTGCAGATGC TAATGTTATT GTTCCCGGTT ATATGGTGCC TTACGCTCGT
TCTGGTTATT GGCGTTGGAT GAAGTTACCC GAAAAAATGG CAACCAAACA AACGGGTTAT
TTATTCCATG GTTGGGGTTT TTCTCAAACC TTCAGTACGT TCTGGATTGA TGCATCGATA
AAAAAGGAAA CCAAAGCGGC GATGAAATCA GGTAAGGCAT TTGAGCCCGT TATTATTATT
GATGAAACCT ATAAATTATA A
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| Protein sequence | MCKPKRINNR KESMTIKNKM TLFSASAALF SVGLFSAELP TNLEWKTNDL APTFASPEAV
FGGTYRTYSL SFPQTFRSVG PDSNGAFRSW IVEANLPPLI QHPNTGEWLP GLATSWAFGD
DNKTMYFKLN PKATWSDGKP VTADDYQFML TLMRSKDIVA PWYNDFFTNE IADVISYDAH
TIGVVSAKER NRDELIQYTN LMPRPAHFYG KPKLDENNDG IDDKFVRKYN FKPEPVTGPY
YIDKIRKGKN IVFKHVGEDW WGYENKYNQN RYNVEKINIK VIRDDDIALK HFEKGNLDSF
TLLRPDLWHE KSNGKNYQNG YIQKAWVYNQ APVGAGGLWL NTAKPMLNDM NIRKGIMYAT
DFDMMIAKVL RGDYSRKPNG MGFGHIGYDN TTINAPTFDA KKAIEYFEKA GFEKIGPDGI
RINAKGERLS FAITYSAQAH TPRIAVLREQ AKLAGVDFEL NLIDGSSMFK YVLEKKHDIS
FHNMGTSEIP AYWEYFHSDN ANKPQTNHFT NFTSPELDTL IDSFKNEFDI DKKQALSREI
QQAIADANVI VPGYMVPYAR SGYWRWMKLP EKMATKQTGY LFHGWGFSQT FSTFWIDASI
KKETKAAMKS GKAFEPVIII DETYKL
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