Gene VSAL_I0848 details

Gene Information

• Locus tag: VSAL_I0848
• Symbol: sucC
• ID: 6989264
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 944824
• End bp: 945990
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643379252
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_002262355
• Protein GI: 209694427
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTAC ATGAATATCA AGCAAAGCAA CTCTTTGCAG AATACGGCCT TCCTGTACCT 
GAAGGTTATG CTTGTGATAC CGCTCAAGAG GCTTTTGAAG CTGCTGGACG TATTAGCACT 
GCGAAAAAAG TGGTTAAGTG TCAAGTCCAC GCTGGTGGTC GCGGTAAAGC GGGCGGTGTT 
GAACTGCATG ACACAAAAGA AGGCGTTAAA GAATTCGCTC AAAAGTGGTT AGGTAAAAAC 
CTAGTGACTT TCCAAACAGA CGCTAAGGGT CAACCAGTCA CAAAAGTATT GGTTGAAGAA 
GCGTCAAATA TTGCAAATGA ATTATACCTA GGTGCGGTTG TTGACCGTGC TACGCGTCGT 
ATCGTGTTCA TGGCATCGAC TGAAGGTGGT GTGGATATTG AGAAGATTGC TGAAGAAACT 
CCAGAGTTAA TTCACCAAGC GGCGATTGAT CCATTAGTTG GTCCTCAAGC TTTCCAAGGC 
CGTGAATTAG CCTTTAAACT TGGTCTTGAA GGCGATCAAA TTAAGCAATT CGTTAAGATC 
TTTCTAGGTC TTGGCAACAT GTTTGCTCAG TATGATTTAG CGCTACTTGA AATTAACCCA 
CTTGTGGTGA CGGCAGAAGG TAACCTTCTG TGTTTAGATG GTAAAATTAA CATTGATTCT 
AATGCTATGT ACCGTCAACC AAAACTGCGT GAAATGCATG ATCCATCTCA AGAAGATGAG 
CGCGAAGCAC ATGCAGCACA ATGGGAATTA AACTACGTTG CCCTAGATGG TAGCATTGGT 
TGTATGGTAA ATGGTGCAGG CCTTGCTATG GGCACAATGG ATATCGTGAA TCTACACGGT 
GGCCAACCTG CTAACTTCCT AGATGTTGGC GGCGGTGCAA CAAAAGAACG TGTAACAGAA 
GCCTTTAAGA TCATCTTATC AGACAGCAAT GTAAAAGCGG TTTTGGTTAA CATCTTTGGT 
GGTATTGTTC GCTGTGACCT TATTGCTGAT GGCATTATTG GTGCGGTTGA AGAAGTGGGT 
GTAAAAGTGC CTGTTGTTGT TCGCCTTGAA GGTAATAACG CACCACTAGG GTCACAAAAA 
CTGGCTGAAA GTGGCCTAAA TATCATTGCG GCTACTTCAT TAACTGAAGC AGCTGAAAAA 
GTTGTTGCTG CTGCGGAGGG CAAATAA 

 

Protein sequence

MNLHEYQAKQ LFAEYGLPVP EGYACDTAQE AFEAAGRIST AKKVVKCQVH AGGRGKAGGV 
ELHDTKEGVK EFAQKWLGKN LVTFQTDAKG QPVTKVLVEE ASNIANELYL GAVVDRATRR 
IVFMASTEGG VDIEKIAEET PELIHQAAID PLVGPQAFQG RELAFKLGLE GDQIKQFVKI 
FLGLGNMFAQ YDLALLEINP LVVTAEGNLL CLDGKINIDS NAMYRQPKLR EMHDPSQEDE 
REAHAAQWEL NYVALDGSIG CMVNGAGLAM GTMDIVNLHG GQPANFLDVG GGATKERVTE 
AFKIILSDSN VKAVLVNIFG GIVRCDLIAD GIIGAVEEVG VKVPVVVRLE GNNAPLGSQK 
LAESGLNIIA ATSLTEAAEK VVAAAEGK