Gene VSAL_I0830 details

Gene Information

• Locus tag: VSAL_I0830
• Symbol: nagA
• ID: 6988879
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 924571
• End bp: 925707
• Gene Length: 1137 bp
• Protein Length: 378 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643379234
• Product: N-acetylglucosamine-6-phosphate deacetylase
• Protein accession: YP_002262337
• Protein GI: 209694409
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1820] N-acetylglucosamine-6-phosphate deacetylase
• TIGRFAM ID: [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.866207
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGCGC TAACTAACTG TAAAGTCTAT ACTGGTAATG ATGTTCTTGT TGATCACTCA 
GTGATTATCA ACGGCACCAA TATTGAAAAA ATCTGCCTAA CATCTGAACT TCCTGATGGC 
ATCGAACGTA AAGATTTAGA CGGTGCTAAT TTAAGCCCTG GTTTCATCGA CCTTCAGCTA 
AATGGCTGTG GTGGTGTAAT GCTAAATGAT GAAATTACAG CAAAAACCAT GCAAATAATG 
CATGAAGCAA ACCTTAAATC AGGTTGTACT AGCTTTTTAC CTACATTAAT CACTTCTTCA 
GACGAAGATA TGCGCGCTTC TATTGAAGCT GCTCGTGAAT ATCACAATAA ATATCAAAAC 
CAATCTTTAG GTTTACACCT TGAAGGTCCG TACCTAAATG TCATGAAAAA AGGCATTCAC 
AGCGTTGATC ATATCCGTCA CTCAGATTCA GATATGATCC AACTTATGTG TGATAACGCT 
GATTTAATCA CCAAAGTGAC ATTGGCTCCT GAGCAAAATG ATCCTGAACA TATTGAGCGT 
CTTCACAAGG CTGGTATTGT TGTTTCAATT GGCCACACAA ACGCAACGTA TGCTGAAGCT 
CGGCAAGGTT TTGAGTCAGG CATTACATTC GCTACTCATT TATTTAATGC AATGACACCA 
ATGGTAGGTC GCGAACCAGG TGTTGTTGGT GCCATCTACG ATACACCAGA CGTTTATGCT 
GGCATTATCG CTGATGGCTT CCATGTTGAT TACGCAAACA TTCGTATCGC GCACAAAATA 
AAGAAAGAAA AGTTAGTATT AGTGACCGAT GCCACAGCTC CTGCAGGTGC TGACATGGAA 
TACTTTATTT TTGTGGGGAA GAAAGTATAT TACAAGGATG GTAAATGTGT TGATGAAAAT 
GGCACATTAG GTGGCTCAGC TCTGACTATG ATTGAAGCAG TTCAGAATAC AGTTGAACAC 
GTTGGAATCG CTTTAGATGA AGCTCTACGT ATGGCTACGT TATATCCTGC TCAAGCAATT 
GGTGTAGATA ATAAACTTGG TCGAATCAAA AAAGACATGG TAGCTAACCT TGCTATTTTT 
GATCGTGACT TTAATGTAAA AGCGACTGTT GTTAACGGAC AATACGAGCA AAGTTAA 

 

Protein sequence

MYALTNCKVY TGNDVLVDHS VIINGTNIEK ICLTSELPDG IERKDLDGAN LSPGFIDLQL 
NGCGGVMLND EITAKTMQIM HEANLKSGCT SFLPTLITSS DEDMRASIEA AREYHNKYQN 
QSLGLHLEGP YLNVMKKGIH SVDHIRHSDS DMIQLMCDNA DLITKVTLAP EQNDPEHIER 
LHKAGIVVSI GHTNATYAEA RQGFESGITF ATHLFNAMTP MVGREPGVVG AIYDTPDVYA 
GIIADGFHVD YANIRIAHKI KKEKLVLVTD ATAPAGADME YFIFVGKKVY YKDGKCVDEN 
GTLGGSALTM IEAVQNTVEH VGIALDEALR MATLYPAQAI GVDNKLGRIK KDMVANLAIF 
DRDFNVKATV VNGQYEQS