| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0615 |
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| Symbol | |
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| ID | 6986568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 676973 |
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| End bp | 677749 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379003 |
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| Product | putative DNase |
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| Protein accession | YP_002262135 |
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| Protein GI | 209694207 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.830738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACAA AACTGATTGA TTCGCACTGT CATTTTGATT TTCCGCCTTT TAAAGACAAT
GAGCTTTTTT ATTTAGAAAA GGCACGCTCT GTTGGTGTGA AAAAACTGAT CATTCCTAGT
GTTAATTCAA GTAATTGGGA GACGGTAGAA CGACTCTCTC ATCAATATCC CGAACTTTAT
TATGCATTAG GTATTCACCC TCAATTTTTA ACTGAGAACG ATGAAGATGA TGTGAAAAAG
TTAGAGGTAT TATTGGCGAA TAAGGCGAAT AAATGCGTCG CTATTGGTGA GTGTGGATTG
GATTTTTGGA ATCAAGAGTA CGATAAAAAA CATCAAATGA ATGTATTTAA AATGCAATGT
AAGTTAGCTG TAAAGTACGA ATTACCTTTG ATTATCCACA GCCGTAAAAG TCATGATGTG
GTATTGAAAA TATTACGAGA GATAAAACCA TTGAAAGGTG GGGTGATCCA CGGTTTTAGT
GGTAGTACGC AACAAGCCGA AGCATTTATT AAACTCGGTT TTTTCATCGG TGTAGGGGGA
GTGATTAGTT ATGATCGTTC GATGAAAACA AAAAGAACAA TTTCTGAGCT TCCTTTAGAG
TGGTTGATGT TAGAAACTGA CGCGCCAGAT ATGCCATTAT CTGGATTTCA AGGCACGCCT
AATACCCCTG ATAAAGTCTC TAATATCCTA GAATGTTTAA TTTTTATACG AAAAGAACCG
AGGGAAACGA TTGCGAATGC TGTTTACAGA AATGCCAATC ATTTGTTTGG GATTTGA
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| Protein sequence | MTTKLIDSHC HFDFPPFKDN ELFYLEKARS VGVKKLIIPS VNSSNWETVE RLSHQYPELY
YALGIHPQFL TENDEDDVKK LEVLLANKAN KCVAIGECGL DFWNQEYDKK HQMNVFKMQC
KLAVKYELPL IIHSRKSHDV VLKILREIKP LKGGVIHGFS GSTQQAEAFI KLGFFIGVGG
VISYDRSMKT KRTISELPLE WLMLETDAPD MPLSGFQGTP NTPDKVSNIL ECLIFIRKEP
RETIANAVYR NANHLFGI
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