| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0521 |
|---|
| Symbol | arcA |
|---|
| ID | 6988255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 575411 |
|---|
| End bp | 576631 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643378899 |
|---|
| Product | arginine deiminase |
|---|
| Protein accession | YP_002262042 |
|---|
| Protein GI | 209694114 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2235] Arginine deiminase |
|---|
| TIGRFAM ID | [TIGR01078] arginine deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGC TATTTGTTGG CTCCGAAATT GGCCAACTTC GTCGTGTCAT TCTTCATCGT
CCAGAGCGAG CATTAAGCCA TTTAACGCCA ACCAACTGTC ACAACCTTCT TTTTGATGAT
GTCCTCTCCG TTGAAAAAGC GCTTCATGAA CACGATCAAT TTGTTGCCAC ACTTAGACAG
CAAGATGTTG AAGTCTTATT ACTTCAAGAT TTACTCGAAG AGACGCTCGC TCATCCAGAA
GCGAAACAAT GGTTATTAAG GCATCAAATT TCTCATTATC GTTTTGGTCC AACCTTTGCT
AATCAAATTA GGGCTTTTCT ACTCGAAAAA AACAACAAAG AGCTCGCCTC AATTTTATTG
GGAGGATTAG CATTTATTGA ATTACCATTC AAAGCGCCTT CAATGCTTCA ACAATTGAGT
GACCCGTTCG ATTTTGTTAT CGACCCACTT CCTAATCATT TATTTACTCG TGATACTTCA
TGTTGGATTT ATGGTGGCGT TTCAATCAAC CCGATGGCAA AAGCCGCTCG TAAAAGAGAA
TCCAACCATT TGCGAGCCAT TTATAAATGG CATCCTTTGT TTTCAAATCA ATCCTTCCCT
CGTTACTTTG GGGATGAAAA TCGCCACTAC GATAACGCGA CGATAGAAGG TGGGGATGTA
TTGATCATAG GCAAAGGAAA TGTACTTGTT GGGATCTCAG AGCGAACAAC CCCACAAGGT
ATTGAAAACC TAGCAAAACA GCTTTTCAGA ACAGAACAAG CCAAACAAGT TATCGCGATT
AAACTGCCTG AAAACCGATC TTGTATGCAT TTAGATACGG TAATGACACA CATGGACCAT
AATGTATTTT CAGTATATCC ACGAGTTATC GATAAAAATA TGCCTTGTTG GTCAATCACT
CCTTGTGGGG ATCAACAATT AGCCATTCAA GAAAAACCTA ATTTTGAACA CTCACTAATG
CAGGCATTAG AACTTGACTC TCTTAATATT ATTACCACCG GTGGGGATAG TTACGAAGCG
GAACGAGAGC AATGGCATGA TGCTAATAAT GTGCTCACAA TTAAACCTGG CGTTGTCGTC
GCGTATGAAC GTAATGTCTA CACCAATGAA AAATACGATA AAGCGGGTAT TACTGTTCTA
CCAATAATGG GGGATGAATT AGGTCGAGGT AGAGGAGGTG CTCGCTGCAT GAGCTGCCCA
ATAGAAAGAG ATGGTATTTA A
|
|---|
| Protein sequence | MSKLFVGSEI GQLRRVILHR PERALSHLTP TNCHNLLFDD VLSVEKALHE HDQFVATLRQ
QDVEVLLLQD LLEETLAHPE AKQWLLRHQI SHYRFGPTFA NQIRAFLLEK NNKELASILL
GGLAFIELPF KAPSMLQQLS DPFDFVIDPL PNHLFTRDTS CWIYGGVSIN PMAKAARKRE
SNHLRAIYKW HPLFSNQSFP RYFGDENRHY DNATIEGGDV LIIGKGNVLV GISERTTPQG
IENLAKQLFR TEQAKQVIAI KLPENRSCMH LDTVMTHMDH NVFSVYPRVI DKNMPCWSIT
PCGDQQLAIQ EKPNFEHSLM QALELDSLNI ITTGGDSYEA EREQWHDANN VLTIKPGVVV
AYERNVYTNE KYDKAGITVL PIMGDELGRG RGGARCMSCP IERDGI
|
|---|
| |