Gene VSAL_I0210 details

Gene Information

• Locus tag: VSAL_I0210
• Symbol: gmk
• ID: 6986376
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 250943
• End bp: 251566
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643378593
• Product: guanylate kinase
• Protein accession: YP_002261751
• Protein GI: 209693823
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAAG GTACACTTTA TATTGTTTCA GCCCCAAGTG GCGCTGGTAA ATCAAGCTTG 
ATCTCTGCAT TAATAGAGAG CAACCCTACT TATGCAATGA AAGTCTCTGT CTCTCATACC 
ACTCGTGGCA TGCGTCCTGG CGAACAAGAT GGTGTTCATT ACCATTTTAT GCAGAAAGAG 
CATTTTGAAG ATCTGATCGA AAAAGAAGAG TTTTTGGAAT ATGCCGAAGT ATTTGGTAAT 
TATTACGGAA CTTCTCGCGT TTGGATCGAA GAAACGTTAG ATAAAGGCAT TGATGTATTT 
TTGGATATTG ATTGGCAAGG TGCTCGTCAA ATTCGCATAC AAATGCCTTT AGCAAAAAGC 
CTTTTCATCT TACCACCTTC AAATGGTGAA CTTGAGCGTC GACTAAATGT TCGCGGGCAA 
GACAGTGAAG CGGTCATTGC GAAACGAATG AGCGAAGCAA AATCAGAAAT TTCTCACTAT 
AATGAATATG ATTATGTGAT TATTAATGAC GATTTTGATA CTGCACAAAT GGATTTTAAA 
GCTATTATCC GTGCAGAGCG CTTAAAACAA GATAAACAAA CATCAAAATA TAAAGGCATG 
TTGTCAGCTC TTTTAGCCGA TTAA 

 

Protein sequence

MSKGTLYIVS APSGAGKSSL ISALIESNPT YAMKVSVSHT TRGMRPGEQD GVHYHFMQKE 
HFEDLIEKEE FLEYAEVFGN YYGTSRVWIE ETLDKGIDVF LDIDWQGARQ IRIQMPLAKS 
LFILPPSNGE LERRLNVRGQ DSEAVIAKRM SEAKSEISHY NEYDYVIIND DFDTAQMDFK 
AIIRAERLKQ DKQTSKYKGM LSALLAD