Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_p08269 |
Symbol | |
ID | 5552673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009777 |
Strand | - |
Start bp | 81733 |
End bp | 82989 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640898146 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_001436136 |
Protein GI | 156936785 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCGCCC TGGTTGATGC CAACGCGTTT TACTGCAGCG CAGAGCAGGT CTTCCGCCCA GAATGGCGTG GTAAGCCTAT CGTGGTACTT TCCAATAACG ATGGTTGTGT GGTCGCCGCG AACCGCCAAG CCAAAGAGTG CGGGATCGAG AAATTTAAGC CCTACTTTCA GATGAAGGCA CTGTGCGAGC AGCGCGGCGT TATTGCCCTC TCCTCTAACT ATGAGCTATA CGCAGACTTG TCGAGCAAGA TGATGGCGGT CATTGGCCGA TTTGCCCCAG AGCAGCACAT CTACTCTATT GATGAATCTT TCCTCTCTTT TGAGCGAACC ACAGCGGCGA TCCCGTGTCT CCGTGAGCAT GGCCAAATGC TCAGAAAATC GGTGTGGCGT GAATGCCGGT TACCCGTTTG TGTCGGGATG GGGCCGACGT TAACTCTGGC CAAAATCGCC AACCATGCCG CCAAGAAGAT CGCTGGGTTT AATGGTGTGT GCGTGCTTGA TGGTGTAACC GAGCGAGAAA GTGTGCTCGC GCAGCTGGCC GTGAGTGATG TGTGGGGCGT CGGCAAACGG CTCACTACCC ACCTAAAGCA ACTAGGTATC ACCACCGCAT TGCAACTGGC CAAGTACCCG GCGCCATTGG CACGCAAGGT GTTTAACGTA GAGTTAGAGC GTACAGTGCG CGAGCTTAAC GGCCAAGTTT GTAAGCAGTG GGATGAGGCG AGAGCAGACA AAAAGCAGAT TTTTTCGACG CGCAGCTTTG GCGAACGGAT AGAGGATGAA ACCTCGTTGC GCCAGGCGTT GTGCCACCAC GCGGGCATCG CTTCGCGTAA AGCGAGAAAG CAGCAATCCT TATGTAAGGT GCTGATGTGC TTTGCATCAA GCTCGCCGTT TGATGATGTG TCTTACAGTC GCCGAGTCGT GCATCGGTTC CCCTACCCGA CGGCAGATGT CACTCAGTTA ACTAAAGTGG TCTCTGAGCT AACCGACCAA CTCTTTTCTG AAGGTGTCCG CTTTTACAAG GTGGGCGTTG GCCTATTGGA TTTAGTCGAC GGGCGGCAAG AGCAAGCGGA TTTATTTAAC CCTACGCCAA ACAACTCGTC GTTGATGTCG GTGTTTGATG GCCTAAATCA ACGTTATGGC CAGAACACGG TATTCCTTGG CGCTCAAGGC ATTGAGCAAA AGTGGCAAAT GCGGCGTCAA CTTCTGACAC CGCAGTACAC GACATGTTGG ACAGATTTGC CTCAGGTTAA GTGCTGA
|
Protein sequence | MFALVDANAF YCSAEQVFRP EWRGKPIVVL SNNDGCVVAA NRQAKECGIE KFKPYFQMKA LCEQRGVIAL SSNYELYADL SSKMMAVIGR FAPEQHIYSI DESFLSFERT TAAIPCLREH GQMLRKSVWR ECRLPVCVGM GPTLTLAKIA NHAAKKIAGF NGVCVLDGVT ERESVLAQLA VSDVWGVGKR LTTHLKQLGI TTALQLAKYP APLARKVFNV ELERTVRELN GQVCKQWDEA RADKKQIFST RSFGERIEDE TSLRQALCHH AGIASRKARK QQSLCKVLMC FASSSPFDDV SYSRRVVHRF PYPTADVTQL TKVVSELTDQ LFSEGVRFYK VGVGLLDLVD GRQEQADLFN PTPNNSSLMS VFDGLNQRYG QNTVFLGAQG IEQKWQMRRQ LLTPQYTTCW TDLPQVKC
|
| |