Gene VIBHAR_p08269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_p08269 
Symbol 
ID5552673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009777 
Strand
Start bp81733 
End bp82989 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content53% 
IMG OID640898146 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001436136 
Protein GI156936785 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCCC TGGTTGATGC CAACGCGTTT TACTGCAGCG CAGAGCAGGT CTTCCGCCCA 
GAATGGCGTG GTAAGCCTAT CGTGGTACTT TCCAATAACG ATGGTTGTGT GGTCGCCGCG
AACCGCCAAG CCAAAGAGTG CGGGATCGAG AAATTTAAGC CCTACTTTCA GATGAAGGCA
CTGTGCGAGC AGCGCGGCGT TATTGCCCTC TCCTCTAACT ATGAGCTATA CGCAGACTTG
TCGAGCAAGA TGATGGCGGT CATTGGCCGA TTTGCCCCAG AGCAGCACAT CTACTCTATT
GATGAATCTT TCCTCTCTTT TGAGCGAACC ACAGCGGCGA TCCCGTGTCT CCGTGAGCAT
GGCCAAATGC TCAGAAAATC GGTGTGGCGT GAATGCCGGT TACCCGTTTG TGTCGGGATG
GGGCCGACGT TAACTCTGGC CAAAATCGCC AACCATGCCG CCAAGAAGAT CGCTGGGTTT
AATGGTGTGT GCGTGCTTGA TGGTGTAACC GAGCGAGAAA GTGTGCTCGC GCAGCTGGCC
GTGAGTGATG TGTGGGGCGT CGGCAAACGG CTCACTACCC ACCTAAAGCA ACTAGGTATC
ACCACCGCAT TGCAACTGGC CAAGTACCCG GCGCCATTGG CACGCAAGGT GTTTAACGTA
GAGTTAGAGC GTACAGTGCG CGAGCTTAAC GGCCAAGTTT GTAAGCAGTG GGATGAGGCG
AGAGCAGACA AAAAGCAGAT TTTTTCGACG CGCAGCTTTG GCGAACGGAT AGAGGATGAA
ACCTCGTTGC GCCAGGCGTT GTGCCACCAC GCGGGCATCG CTTCGCGTAA AGCGAGAAAG
CAGCAATCCT TATGTAAGGT GCTGATGTGC TTTGCATCAA GCTCGCCGTT TGATGATGTG
TCTTACAGTC GCCGAGTCGT GCATCGGTTC CCCTACCCGA CGGCAGATGT CACTCAGTTA
ACTAAAGTGG TCTCTGAGCT AACCGACCAA CTCTTTTCTG AAGGTGTCCG CTTTTACAAG
GTGGGCGTTG GCCTATTGGA TTTAGTCGAC GGGCGGCAAG AGCAAGCGGA TTTATTTAAC
CCTACGCCAA ACAACTCGTC GTTGATGTCG GTGTTTGATG GCCTAAATCA ACGTTATGGC
CAGAACACGG TATTCCTTGG CGCTCAAGGC ATTGAGCAAA AGTGGCAAAT GCGGCGTCAA
CTTCTGACAC CGCAGTACAC GACATGTTGG ACAGATTTGC CTCAGGTTAA GTGCTGA
 
Protein sequence
MFALVDANAF YCSAEQVFRP EWRGKPIVVL SNNDGCVVAA NRQAKECGIE KFKPYFQMKA 
LCEQRGVIAL SSNYELYADL SSKMMAVIGR FAPEQHIYSI DESFLSFERT TAAIPCLREH
GQMLRKSVWR ECRLPVCVGM GPTLTLAKIA NHAAKKIAGF NGVCVLDGVT ERESVLAQLA
VSDVWGVGKR LTTHLKQLGI TTALQLAKYP APLARKVFNV ELERTVRELN GQVCKQWDEA
RADKKQIFST RSFGERIEDE TSLRQALCHH AGIASRKARK QQSLCKVLMC FASSSPFDDV
SYSRRVVHRF PYPTADVTQL TKVVSELTDQ LFSEGVRFYK VGVGLLDLVD GRQEQADLFN
PTPNNSSLMS VFDGLNQRYG QNTVFLGAQG IEQKWQMRRQ LLTPQYTTCW TDLPQVKC