Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_p08224 |
Symbol | |
ID | 5552711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009777 |
Strand | + |
Start bp | 48118 |
End bp | 49014 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640898101 |
Product | hypothetical protein |
Protein accession | YP_001436091 |
Protein GI | 156936740 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.0000213118 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTCCT TTGAATCACT CAACCAAGTC ACTCCCAGTC CAGCGCTAGA TGCGAAGGAT AAACATGCGC GTAAGCTCAG AAAAGAATCC AACGCTATCT ACCGTGCTAA TCGCAAAGCA AGAGTTCGTG AGTGCATAGA GATCCATCAT GACGCGGTGG CAGCAGAGAA AGCGCGACTT AAAGCAAAGG GTAAAGCATT CACTAACTTG GAAATTGGCT TTACAAAGCG TCGTGTATTG CGTGATAAGA AAAATCCGAA AGTCATAAAC CTCCCCCTTG AGTTTGCAAC AATTCTTAAA GGTTGCGAAG AGTTTATCGA TAACCCAAGC CGCTTCCCTG CTTTAGATAT CTGGGTATCT GAAATGCGCA ATCGCCAAGC TCGCGAGCTA GTTGCTAAAG TTTTAGCGTG TCTGTTAAGT AACACTGACA TGATAAGTGG TCGCGTCGGT AAGCCAACTG AAGCTGGCAT GAAAACACTG AGCTATTATC AACTCCAAGA AGATTATGCC TTGCGCTTTG GCGAGTACAT TGCACCAAAG TCATTTGGGA AAGCGATTAA GTACCTAAAA CAAGCGGGTT ACTTTCACTC TGAAGCGATC AATATCCGAA TGGAAGACGG TGAAGGTGCT GTTCGCAGTG CTCCTGCCTA CAAGCAGTTC TCTGAGCGTT TCTTTAGTGA TCTTAAAGTT GTTCGCTACA GTAACGTTGC TGAATCCATA GTTGCTACAC GTAAGCGTCA GATGAAAGAA GGTCTACGTC ATACGTGGGT AAGCTTTCGT GAAATCGCTA ATGGTGTCAG ACAGATATTC TTGAACGCCA ACAAATTTGA GAGTATTGCT GAGTCTACAG GTCGAGTGTT CGAAGCGTAT CTTCCTCTTC ATCCCAATCC ACACTAA
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Protein sequence | MQSFESLNQV TPSPALDAKD KHARKLRKES NAIYRANRKA RVRECIEIHH DAVAAEKARL KAKGKAFTNL EIGFTKRRVL RDKKNPKVIN LPLEFATILK GCEEFIDNPS RFPALDIWVS EMRNRQAREL VAKVLACLLS NTDMISGRVG KPTEAGMKTL SYYQLQEDYA LRFGEYIAPK SFGKAIKYLK QAGYFHSEAI NIRMEDGEGA VRSAPAYKQF SERFFSDLKV VRYSNVAESI VATRKRQMKE GLRHTWVSFR EIANGVRQIF LNANKFESIA ESTGRVFEAY LPLHPNPH
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