Gene VIBHAR_07088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_07088 
Symbol 
ID5558826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp2159128 
End bp2159811 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content44% 
IMG OID640911554 
Producthypothetical protein 
Protein accessionYP_001449187 
Protein GI156978281 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCCA AATTGAAGCG TAAAGTTACA TTATTAATCA GCATCAGTTG TTTTTCGTTC 
CAAATTGGGG CGCTCAACAG CAAAGAGCAA CGATGGGTCG ATACGGTCAC TTCAGTTTAT 
GGTGAACGCG CAGGGCAGCG CGTCAAAACA TGGCGAGAGA ATTTGGATTC CTTACAAGTC 
CAGAGCAATA AAAAGAAACT CTCCGGTGTG AACAACTTTT TTAACCAACT CTATTTTGTC 
GATGACATCA ATTTGTGGGG CAAAAAAGAC TATTGGGCAA CACCACTCGA GTTTATAGGC 
AGTAATGCCG GCGATTGTGA AGACTTCACG ATAGCGAAGT ATTTCTCATT GCTCGAACTC 
GGAATCCCAG ATTCAAAAAT GCGCTTGGTC TACGTTAAAG CGATCAGACT AAATCAATTT 
CACATGGTGC TGGCGTATTA CCCAACACCA AGCTCTGAGC CGCTCATCCT CGACAATCTC 
AATCCAGAAA TTGTTCGAGC TTCCAAGCGT AGCGACTTGC TACCGATTTA CAGTTTTAAT 
GGTAAAAACT TGTGGCTAAT GAAGTCTTCT GCCAGCAGTG GAGAGCTAGC AGGAAAAGCC 
TCACGTTTGA GCCTTTGGAA TGACTTACGC TCGCGCGAAC GTAAGTTGCA GTTAAAGAAA 
CCTAAAATTA ACTATGACGA GTGA
 
Protein sequence
MPSKLKRKVT LLISISCFSF QIGALNSKEQ RWVDTVTSVY GERAGQRVKT WRENLDSLQV 
QSNKKKLSGV NNFFNQLYFV DDINLWGKKD YWATPLEFIG SNAGDCEDFT IAKYFSLLEL 
GIPDSKMRLV YVKAIRLNQF HMVLAYYPTP SSEPLILDNL NPEIVRASKR SDLLPIYSFN 
GKNLWLMKSS ASSGELAGKA SRLSLWNDLR SRERKLQLKK PKINYDE