Gene VIBHAR_07043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_07043 
Symbol 
ID5557397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2117079 
End bp2117933 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content47% 
IMG OID640911511 
ProductABC-type transporter ATPase componen 
Protein accessionYP_001449144 
Protein GI156978238 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAC TAAACCTGAA TCAGGCATTC CACTCTGATC CCGTCATTCA GATCAGAAAC 
TTATGCGTGG ACTATATCAC CGACAACGGT GATTTTAATG CCGTGAAATC GGTAAGCTTC
GATATTGGCA AAGGCGAAAT ATTTGGTCTG GCGGGTGAAT CTGGCTGTGG CAAAAGTACC
ATAGCATTCT CTATCAACCG TCTACACAAG CCGCCTGCAT TTATCTCTGG GGGACAGATT
CTATTTGAAG GCAAGGATAT CCTTCGTCTG CCTGACAACG AGCTAAATAC GCTGCGCTGG
AGCGAGATTG CCATGGTGTT TCAAAGTGCC ATGAACTCGC TAAATCCCGT TGTCACTGTT
CAAGAACAGT TTGCCGACGT ATTACGCCAC CACAAAGGAT TAACTAACGA GCAAGCCAAA
GAGCGTGCAG AGAAGCTTCT CGACTTAGTC AACATTCCGA GAAATCGTCT GGGCGAATAC
CCACACCAGT TCTCCGGCGG CATGCGTCAG CGCTTGGTGA TTGCAATCGC CCTATCCCTC
AACCCGAAGC TGATCATCAT GGATGAGCCA ACCACAGCGC TTGATGTGGT AGTTCAACGC
GAAATCCTGC AGCAAATCTA TCAACTACGT GATGAGTTTG GTTTCTCGGT ACTTTTTATT
ACCCATGATT TAGCTCTCAT GAGCCAATTG TGCGACCGCA TTGCCATCAT GCGCCACGGC
AAGATTGTTG AAGTAAACAG CTCATACGAA ATCCGTAATC ATCCTCAACA CGAATACACC
CAAAAACTTT GGGCTTCATT CCCAAATATT CACGATGTAC ACAAACAGCC GCAAACGGAA
GGAGCGCCAG CATGA
 
Protein sequence
MSELNLNQAF HSDPVIQIRN LCVDYITDNG DFNAVKSVSF DIGKGEIFGL AGESGCGKST 
IAFSINRLHK PPAFISGGQI LFEGKDILRL PDNELNTLRW SEIAMVFQSA MNSLNPVVTV
QEQFADVLRH HKGLTNEQAK ERAEKLLDLV NIPRNRLGEY PHQFSGGMRQ RLVIAIALSL
NPKLIIMDEP TTALDVVVQR EILQQIYQLR DEFGFSVLFI THDLALMSQL CDRIAIMRHG
KIVEVNSSYE IRNHPQHEYT QKLWASFPNI HDVHKQPQTE GAPA