Gene VIBHAR_06892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06892 
Symbol 
ID5557879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1991605 
End bp1992024 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content47% 
IMG OID640911361 
Productmethylmalonyl CoA epimerase 
Protein accessionYP_001448994 
Protein GI156978088 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACC AGCGCAACCC CATTGAAATC AAGGCACTCG ACCACGTGGT ATTGAGAACG 
GATAATCTCG ATGCGATGCT CCGTTTCTAT CGAGACCTAT TGGGGTGTCC TATCGAGCGG
GAATTGCCGG ATTTAGGGCT GACGCAGTTA CGTGCTGGCA CAGCCATCAT TGATTTGGTG
ACAGTTGAGA GTGAACTTGG AAAGTTAGGC GGTAAATCGC CAAGCCAAGA TGGCCGCAAT
CTCGACCATT TCTGCCTGCA AATTGCGCCT TTTGAAGAGT CTGAGTTACT TGAATATCTT
CATCAACATA ATGTCCATGT AGAAGAGTTT GCTGAACGAT ATGGTGCACA GGGCTTTGGT
CGCTCTGTGT ATTTAGAAGA CCCAGAAGGC AATGTGGTCG AGCTTAAACC ACAGAAATAA
 
Protein sequence
MANQRNPIEI KALDHVVLRT DNLDAMLRFY RDLLGCPIER ELPDLGLTQL RAGTAIIDLV 
TVESELGKLG GKSPSQDGRN LDHFCLQIAP FEESELLEYL HQHNVHVEEF AERYGAQGFG
RSVYLEDPEG NVVELKPQK