Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06892 |
Symbol | |
ID | 5557879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1991605 |
End bp | 1992024 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640911361 |
Product | methylmalonyl CoA epimerase |
Protein accession | YP_001448994 |
Protein GI | 156978088 |
COG category | [R] General function prediction only |
COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACC AGCGCAACCC CATTGAAATC AAGGCACTCG ACCACGTGGT ATTGAGAACG GATAATCTCG ATGCGATGCT CCGTTTCTAT CGAGACCTAT TGGGGTGTCC TATCGAGCGG GAATTGCCGG ATTTAGGGCT GACGCAGTTA CGTGCTGGCA CAGCCATCAT TGATTTGGTG ACAGTTGAGA GTGAACTTGG AAAGTTAGGC GGTAAATCGC CAAGCCAAGA TGGCCGCAAT CTCGACCATT TCTGCCTGCA AATTGCGCCT TTTGAAGAGT CTGAGTTACT TGAATATCTT CATCAACATA ATGTCCATGT AGAAGAGTTT GCTGAACGAT ATGGTGCACA GGGCTTTGGT CGCTCTGTGT ATTTAGAAGA CCCAGAAGGC AATGTGGTCG AGCTTAAACC ACAGAAATAA
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Protein sequence | MANQRNPIEI KALDHVVLRT DNLDAMLRFY RDLLGCPIER ELPDLGLTQL RAGTAIIDLV TVESELGKLG GKSPSQDGRN LDHFCLQIAP FEESELLEYL HQHNVHVEEF AERYGAQGFG RSVYLEDPEG NVVELKPQK
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