Gene VIBHAR_06887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06887 
Symbol 
ID5558363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1989279 
End bp1989668 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content47% 
IMG OID640911356 
Productprotoporphyrinogen 
Protein accessionYP_001448989 
Protein GI156978083 
COG category[S] Function unknown 
COG ID[COG3349] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGCC ATTCTATTAG TGAAGGGGAG GTTGAGGCTT GCGCTAGCGC AGGCCGTTCT 
CGCCCGAAAG TCGCGATTTT TGGCGCGGGA ATTTCAGGCT TAGCCGTCGC GCATAATTGT
ATAAAGCAAG GCTTTGATGT TGCCGTTTAC GACAAGGAGC TCTACACCGG AGGCAAGCGC
ATTGGTACGG TAGATGATGG CGGTGTGGTA CATGAGCTCA CACATCGACA GTTCTTCGCT
AAAAACTACA ACCTGATTAA CTTTCTTAAA GAAATCCCTT CAGAGTCAGG GAGTTGTTTA
GATTCACTCT ACCCTCAAAA TGTTGTTCAA TTCTCTTGGG CTCTAAGTAA GAAACGATCC
CGTTTCAGCG TAGCTATTTC ACTCGCCTAG
 
Protein sequence
MICHSISEGE VEACASAGRS RPKVAIFGAG ISGLAVAHNC IKQGFDVAVY DKELYTGGKR 
IGTVDDGGVV HELTHRQFFA KNYNLINFLK EIPSESGSCL DSLYPQNVVQ FSWALSKKRS
RFSVAISLA