Gene VIBHAR_06849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06849 
Symbol 
ID5557529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1960977 
End bp1961708 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content48% 
IMG OID640911318 
Producthypothetical protein 
Protein accessionYP_001448951 
Protein GI156978045 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGAAAG TAGTCATCAT CACAGGCGCA AGCCGAGGCA TCGGAGCCGC AACCGCCAAA 
TTACTCGCCA AGCAAGGCTA TGCCGTATGC GTTAACTATC GCACTCAAGC CGATGCTGCC
GCGCAAGTTG TTGGTGAAAT TGAGAAAAGT GACGGTAAAG CCATCGCCAT CAAAGCGGAT
GTTTCCGATG AGCAGCAGGT ACTCTCATTG TTTGAAAAAA CTGAACAAGT ACTCGGAAAA
GTCACTCACC TCGTCAACAA CGTGGGCATC TTATTCACTC AATCTCGTCT TGCGGACATG
AGCCTTGAGC GATTCCAAAC TGTGATGAAT GCTAATGTGA CGAGCTGTTT TCTTTGTTGT
AGAGAAGCAG CAAAACGATT TGAATCTGAC AATGCGATTG TTAATGTTTC TTCTGCCGCA
TCCCGCTCTG GTGCGCCATT TGAATACGTT GATTACGCTG CCTCTAAAGG CGCAATGGAC
TCACTAACCA AAGGGTTATC TTTGGAATTA GCTGAGCAAA ACATCCGTGT AAACGGTGTT
CGGCCCGGCT GTATTTACAC CGATATTCAT GCCGATGGCG GCGAGCCGAA TCGAGTCGAC
AGGCTCAGTG AAAAAATCCC TCTCAAACGA GGTGGCACGG TAGATGAAGT GGCCAATGCC
ATCGCGTGGT TACTGAGTGA TGAAGCTTCT TATGTCACTG GATCGTTTAT CGATCTTGCA
GGCGGAAATT AA
 
Protein sequence
MQKVVIITGA SRGIGAATAK LLAKQGYAVC VNYRTQADAA AQVVGEIEKS DGKAIAIKAD 
VSDEQQVLSL FEKTEQVLGK VTHLVNNVGI LFTQSRLADM SLERFQTVMN ANVTSCFLCC
REAAKRFESD NAIVNVSSAA SRSGAPFEYV DYAASKGAMD SLTKGLSLEL AEQNIRVNGV
RPGCIYTDIH ADGGEPNRVD RLSEKIPLKR GGTVDEVANA IAWLLSDEAS YVTGSFIDLA
GGN