Gene VIBHAR_06717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06717 
Symbol 
ID5558495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1851212 
End bp1852222 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content47% 
IMG OID640911185 
Producthypothetical protein 
Protein accessionYP_001448828 
Protein GI156977922 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA ATAAGCTGGT AAAAGCTTTA GCTGTCGCTG TGACTTCTTT TGGTATTGCT 
GCTAATACAG TAGCGGAAGA GCGTAGCTAC ATTCTTGCAA CGGCATCGAC AGGCGGAACT 
TACTACCCAG TGGGTGTAGC ACTGGCGACA TTAAGTAAAG TGAAATTAGC ACCTAAACAT 
CACTTCTCCC TTTCTGCTAT TAGCTCTGCT GGATCTGGTG AAAACGTCAA ACTGTTGAAC 
GAAAACGAAG CCCAGTTCGC GATTCTGCAG GGCTTATACG GTGCGTGGGC TTGGTCTGGC 
GAAGGTCCTT ATGAGAAGAG TGGTCGCCAA GAGCAGCTGC GTTCAGTCTC TATGCTGTGG 
CAAAATGTTG AGCACTTTAT TGTTCGCTCT GACCTAGCAA AAACGGGCAC GGTGACAGAT 
CTAAACAACC TAGATGGTAA GAAGTTCTCC ATCGGTAAGA AAAACTCTGG TACAGAGAAT 
TCTGGTCGTC AAATCATGAA AGGTCTGAAT GTCGACCCAG ATAAATTCAA TCTAGCCTAC 
ATGGGCTACG GCGGTAGCGC GAGTGCGCTT CAAAACGGCA CTATTGACGG CATGAACACG 
CCTGCGGGTG TCCCCGTTGG GGCGGTCACT CAAGCTTTTG CTGCGCTAGG TAAAGACATC 
TCGATTCTTT CGTTTACAGA CGAACAAATC AAAGAGGCGA ATGGCCACTA TAACCTTTGG 
ACGAAATACG AGATCCCAGC CAACACCTAC CCAGGTCTGG ACAAGCCGAT CACGACTATC 
GCACAACCAA ACTTCTTGGC CGTTCGTGAA GATATCTCGG AAGAAGACGT ATACCAGCTA 
ACGAAAGCAA TATACGAGAA CTTGCCATTC CTACAAGGTA TTCATAAAGC AACCAAAGCA 
ATGGCGATGG AAAAAGCAAT TGCTGGCTTG CCAGTACCTC TTCACCCAGG TGCCGCGCGT 
TACTACAAAG AAATGGGCAT CGAAATCCCA TCAGACCTAA TGGCGAAATA A
 
Protein sequence
MKMNKLVKAL AVAVTSFGIA ANTVAEERSY ILATASTGGT YYPVGVALAT LSKVKLAPKH 
HFSLSAISSA GSGENVKLLN ENEAQFAILQ GLYGAWAWSG EGPYEKSGRQ EQLRSVSMLW 
QNVEHFIVRS DLAKTGTVTD LNNLDGKKFS IGKKNSGTEN SGRQIMKGLN VDPDKFNLAY 
MGYGGSASAL QNGTIDGMNT PAGVPVGAVT QAFAALGKDI SILSFTDEQI KEANGHYNLW 
TKYEIPANTY PGLDKPITTI AQPNFLAVRE DISEEDVYQL TKAIYENLPF LQGIHKATKA 
MAMEKAIAGL PVPLHPGAAR YYKEMGIEIP SDLMAK