Gene VIBHAR_06694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06694 
Symbol 
ID5556633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1829940 
End bp1830953 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content45% 
IMG OID640911163 
Producthypothetical protein 
Protein accessionYP_001448808 
Protein GI156977902 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG AATTTAAAAA ATCAACCGCG AATCTAAAAA AAGCGGTACC ACTAATGATC 
AAGAACCACG TAGCAGCGAC ACCAGCAAAC TACGCCTTGT GGTACACCTA CGTAGACAAA 
ACCATCCCAG AGCTTAACCA AGAGTTAGAT ATGGTTCTGG AGAATTATGA CGTCTGCCCA 
CCAGCGATGC ACAAGCAGCT CTACAACAGC TACGTCGCGA GTAAAGCCGA AACCAGTTTA 
GAAGAACTCA AAACCAACGT AGAAGTGCTG TTGGGTGAAG TATCTAGCTC GATGAGTGAC 
ACTATTACGG ATACCTCCTC CTTCTCTGAT ATGGTGGACA AAAGCTTTAA CAAGCTTGAA 
AAGGTTGAAG ATAATAGCCT GAGTATTGAA GAAGTGATGA ATGTGGTTCG TCAGCTCGTC 
GCGGAATCTC GTGAAATTCG TCACTCGACT CAGTTTCTAA ATAGCCAACT AACAACGGCT 
AGTGAAGAAA TTTCTCGTCT AAAAAACCAA TTGGCCGAAG TACAAAAAGA CGCTCTTTTC 
GATGGTCTTT CCAATCTGTA TAACCGCCGT GCTTTCGACA GTGACCTCCA AATGCTGATC 
GACAGCAATC AAGCAATGAC CTTGGTTATG CTGGATATTG ATCACTTCAA AGCATTTAAC 
GACAATTACG GCCACTTGTT TGGCGATACC GTTATCAAAG CCATCGCACG TCGTCTGCAA 
CAAAGCTGTC GTGATGGCAT CAGCGCTTAC CGCTTTGGTG GCGAAGAGTT TGCTTTGATC 
ATACCGAATA AATCGTTGCG CATCGGTCGT CAATACGCCG ATACGTTACG CCGAATGATC 
GAAAAGCTGC GTGTCCGTGA CAAACGTTCG GGCAGCCAAG TGCAAAGTAT TACCGCTTCT 
TTTGGTGTCG CAGAGTATGA AGTTGGCGAT ACGTTGGAAA GCTTGGTTAA TAAGGCTGAT 
AAACAGTTGT ATGAAGCAAA ACAACTGGGC CGAAACCGAG TAATGCCGCT GTAG
 
Protein sequence
MTDEFKKSTA NLKKAVPLMI KNHVAATPAN YALWYTYVDK TIPELNQELD MVLENYDVCP 
PAMHKQLYNS YVASKAETSL EELKTNVEVL LGEVSSSMSD TITDTSSFSD MVDKSFNKLE 
KVEDNSLSIE EVMNVVRQLV AESREIRHST QFLNSQLTTA SEEISRLKNQ LAEVQKDALF 
DGLSNLYNRR AFDSDLQMLI DSNQAMTLVM LDIDHFKAFN DNYGHLFGDT VIKAIARRLQ 
QSCRDGISAY RFGGEEFALI IPNKSLRIGR QYADTLRRMI EKLRVRDKRS GSQVQSITAS 
FGVAEYEVGD TLESLVNKAD KQLYEAKQLG RNRVMPL