Gene VIBHAR_06533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06533 
Symbol 
ID5557567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1684570 
End bp1685223 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content44% 
IMG OID640911006 
Producthypothetical protein 
Protein accessionYP_001448651 
Protein GI156977745 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAACA ACAACACAAT CAAAAACACC ATCTTATTGT TTACCTTCAA TAATATTCAA 
GGTCGAGGTT TACAAACCGC CATTGAACAA CAACTTGGGC AGCCGGTGTT ATTGGCCAAA 
GGCGCTGAAG TTGACTTACC TCCTCACCAA GATGAGCACT ATGTCGCAAT CGTCGATAGC 
TCGTTACCTG ATCTTTCTGA AGTCAAGATG ACACTCAGTG AATTGGAACA TGTCGATGCG 
ACCATATTAG TAAACGCCGA ACCCAACTTA GGTGTAGAAA GCCTGCTCAC TTGGTCAAAT 
CTGAAAGGCT TATTCTATTT TGAAGATGAC TTCGACAAGG TAATCAGAGG TTTAAAAGGG 
ATATTGAGCG GAGAGAATTG GCTCTCTCGA GACATCCTCA ACCGATTAGT TGGCTATCTC 
GTTAACTTAA ATCACACCGT TACTGAGCTG GATACGAAAC TAGAAATTGA GCTTACTCGC 
CGAGAAATGC AGGTTCTGAC AGCCCTTTGC CAAGGGGGCT CAAATCTTGA TATTGCAGAC 
TCACTGTTTG TCAGCGAGCA CACGGTGAAA TCCCATCTCT ATAGCATTTT CCGCAAACTG 
GAAGTGAAGA ACCGAATGCA AGCGGTCGCT TGGGCAAAAC GTAACTTGTC CTAG
 
Protein sequence
MLNNNTIKNT ILLFTFNNIQ GRGLQTAIEQ QLGQPVLLAK GAEVDLPPHQ DEHYVAIVDS 
SLPDLSEVKM TLSELEHVDA TILVNAEPNL GVESLLTWSN LKGLFYFEDD FDKVIRGLKG 
ILSGENWLSR DILNRLVGYL VNLNHTVTEL DTKLEIELTR REMQVLTALC QGGSNLDIAD 
SLFVSEHTVK SHLYSIFRKL EVKNRMQAVA WAKRNLS