Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06436 |
Symbol | |
ID | 5557232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1592323 |
End bp | 1592967 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640910909 |
Product | hypothetical protein |
Protein accession | YP_001448554 |
Protein GI | 156977648 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAGT GTAAAAAGTT TATTTTTGAT GTCGATGCAA CGTTAGTTGA TACTCAGGCC GTAATAGACA ATATCTGGAA AAAGTGGTGT GAGACCGTTG GTGTCAGCTA TGTTGATATG AGCCAATACA TCCACGGAAG AAAAATTGAA GAAACCTTGC ACTGTATATC CCCAAGTTAC GCTTGTGACG TACAAGTAGA GAAAGTAAAA AGCATCGCAT TGTCTGAGAT GACAAAGGCA CAGGCGATAT CCAATGCCCA TTCATTCATT TCCAACCTTA GTCCTAATGC TTGGGGTATT GCAACAAGCG GGCCAAAAAA AGTGGCGACC ACCAGTCTAC TAGCGTCAGG CTTTGATCTA CCTAAAGTGA TGATATGGGC CGAGGACGTC CTTAAGGGCA AACCAGACCC AGAACCGTTT ATTAAAGCCG CTCATGCACT GAATGTCATT CCGTCCGAAT GTGTGGCATT CGAAGATTCC CCCTCGGGCG TGTTATCAGC GAAAAGAGCT GGATGCTTTA CGGTCGCGCT ACTCACTAGC CATAGAGAAG ATGAACTAAA AGATGCAGAC CTTATCGTGC AAGGCTTTGG GCACCTAACG GTGATCAAAA ACCACAATGG CTCTTATTGT CTAGCGGCTT CATAA
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Protein sequence | MIECKKFIFD VDATLVDTQA VIDNIWKKWC ETVGVSYVDM SQYIHGRKIE ETLHCISPSY ACDVQVEKVK SIALSEMTKA QAISNAHSFI SNLSPNAWGI ATSGPKKVAT TSLLASGFDL PKVMIWAEDV LKGKPDPEPF IKAAHALNVI PSECVAFEDS PSGVLSAKRA GCFTVALLTS HREDELKDAD LIVQGFGHLT VIKNHNGSYC LAAS
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