Gene VIBHAR_06436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06436 
Symbol 
ID5557232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1592323 
End bp1592967 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content45% 
IMG OID640910909 
Producthypothetical protein 
Protein accessionYP_001448554 
Protein GI156977648 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAGT GTAAAAAGTT TATTTTTGAT GTCGATGCAA CGTTAGTTGA TACTCAGGCC 
GTAATAGACA ATATCTGGAA AAAGTGGTGT GAGACCGTTG GTGTCAGCTA TGTTGATATG
AGCCAATACA TCCACGGAAG AAAAATTGAA GAAACCTTGC ACTGTATATC CCCAAGTTAC
GCTTGTGACG TACAAGTAGA GAAAGTAAAA AGCATCGCAT TGTCTGAGAT GACAAAGGCA
CAGGCGATAT CCAATGCCCA TTCATTCATT TCCAACCTTA GTCCTAATGC TTGGGGTATT
GCAACAAGCG GGCCAAAAAA AGTGGCGACC ACCAGTCTAC TAGCGTCAGG CTTTGATCTA
CCTAAAGTGA TGATATGGGC CGAGGACGTC CTTAAGGGCA AACCAGACCC AGAACCGTTT
ATTAAAGCCG CTCATGCACT GAATGTCATT CCGTCCGAAT GTGTGGCATT CGAAGATTCC
CCCTCGGGCG TGTTATCAGC GAAAAGAGCT GGATGCTTTA CGGTCGCGCT ACTCACTAGC
CATAGAGAAG ATGAACTAAA AGATGCAGAC CTTATCGTGC AAGGCTTTGG GCACCTAACG
GTGATCAAAA ACCACAATGG CTCTTATTGT CTAGCGGCTT CATAA
 
Protein sequence
MIECKKFIFD VDATLVDTQA VIDNIWKKWC ETVGVSYVDM SQYIHGRKIE ETLHCISPSY 
ACDVQVEKVK SIALSEMTKA QAISNAHSFI SNLSPNAWGI ATSGPKKVAT TSLLASGFDL
PKVMIWAEDV LKGKPDPEPF IKAAHALNVI PSECVAFEDS PSGVLSAKRA GCFTVALLTS
HREDELKDAD LIVQGFGHLT VIKNHNGSYC LAAS