Gene VIBHAR_06213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06213 
Symbol 
ID5558188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1396379 
End bp1397437 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content43% 
IMG OID640910687 
Producthypothetical protein 
Protein accessionYP_001448332 
Protein GI156977426 
COG category 
COG ID 
TIGRFAM ID[TIGR02566] CRISPR-associated protein, Csy3 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAC CCTCGAGTCT AGCCTATGAG CGCTCTATCG ACCCATCAGA TGTCTGCTTT 
TTTGTCGTTT GGCCCGACGA TAAAAAAACT CCTTTAACTT ATACATCTCG TACTTTGCTC
GGACAAATGG AAACGGCATC ATTAGCGTAT GATACATCCG GTCAACCCAA GAAAAGTGTT
ACTGCTGAGG CTTTGGCTCA AGGGAACCCG CACCAAGTTG ACTTCTGTCA CGTTCCATAT
GGTGCTAGTC ATGTCGAATG CTGCTTTTCC GTCTCTTTTT CTTCTGAGCT ACGCAAACCG
TATAAATGTA ATTCAAGCTC AGTCAAACAA ACGTTAGTGA AACTTGTAGG ACTGTATGAG
AAGAAAATCG GCTGGACTGA GCTAGCTACC CGATACTTGA TCAATATATG CGACGGCACG
TGGCTGTGGA AAAATACCCG CAAGGCTTAT TGCTGGAACA TTGAACTTAC ACCCTGGCCA
TGGAACGGGG AAAACGTTAA ATTTGAAGAT ATCCGTAATA ACTACATATC ACGAAAAGAC
TTTGAAAATC ATAAAGATTG GTCGGGTATG ACTGAAATGA TAAAAACCGC TTTTTCCAGC
TCTAATGGAC TGGCGATACT TGAAGTCAAA GCCACCGTGC ACCTGCCAAC CAATGCCATG
GTACGACCAA GCCAAGCTTT CACAGAAAAG GAAAACGGTA GTAAAAACAA ATCTAAATCT
CAAAACAGTC GAGTTTTTCA GCATACAGTT ATTGATGGCG AACGTAGTCC TATATTAGGA
GCCTTTAAAA CTGGAGCAGC TATTGCAACC ATTGACGACT GGTATCCTGA AGCAACTGAG
ACATTGAGGG TTGGAAGGTT TGGCGTTCAT CGCGAAGATG TCACTTGCTA TCGTCATCCC
TCTACAGGAA AAGATTTGTT TTCGTTACTG CAAAAAGCAG ATCATTACAT TGAAGTGTTG
AGCTCTAACG AAGCTCCAGA TCAAGAAGCT ATCAATGATA TGCACTTCGT AATGGCAAAC
TTGATCAAGG GTGGATTGTT CCAGCATAAA GGAGACTGA
 
Protein sequence
MKLPSSLAYE RSIDPSDVCF FVVWPDDKKT PLTYTSRTLL GQMETASLAY DTSGQPKKSV 
TAEALAQGNP HQVDFCHVPY GASHVECCFS VSFSSELRKP YKCNSSSVKQ TLVKLVGLYE
KKIGWTELAT RYLINICDGT WLWKNTRKAY CWNIELTPWP WNGENVKFED IRNNYISRKD
FENHKDWSGM TEMIKTAFSS SNGLAILEVK ATVHLPTNAM VRPSQAFTEK ENGSKNKSKS
QNSRVFQHTV IDGERSPILG AFKTGAAIAT IDDWYPEATE TLRVGRFGVH REDVTCYRHP
STGKDLFSLL QKADHYIEVL SSNEAPDQEA INDMHFVMAN LIKGGLFQHK GD