Gene VIBHAR_06177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06177 
Symbol 
ID5558183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1356049 
End bp1356891 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content48% 
IMG OID640910651 
Productglycine betaine/L-proline ABC transporter permease protein 
Protein accessionYP_001448296 
Protein GI156977390 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4176] ABC-type proline/glycine betaine transport system, permease component 
TIGRFAM ID[TIGR03416] choline ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTTA TTACGGACAA CAAACTTCCG TTGGGCGAAT GGATGGAAAC GGGCGTGGAT 
TGGTTAACCA TGAACGCGTC GGGTTTCTTT GATGCTATCT CTATTTTTCT CGAAACCATC
ATTTTATTCG TGGTGGATAT CTTTAAATGG ATGCCACCGG CAGCACCAAT CATCATGACC
GCAGCGATTG CGTGGTTCCT ACACCGCAGC ATTCCTTTAG TTGTGTTTAT TGTGCTAGCG
CTGCTGACTA TCCTTAACCT CGGCTACTGG CAAGAAATGC TGGAAACCTT TGTTCTCGTC
TTCGCTGCGA CAACGATTTC CGTATTAATT GGCGTGCCGC TTGGCATCAT GGCGGCGCAT
CGCCCGTGGT TGTACACCTT ATTGCGCCCG ATACTCGATT TAATGCAGAC GGTGCCAACG
TTTGTGTATC TGATCCCAAC ATTGGTTCTG TTTGGTTTGG GTATCGTTCC GGGTCTGATT
TCTACGATTA TCTTTGCCAT CGCCGCGCCG ATTCGTCTGA CTTACCTTGG CATCACCAAA
GTGCCAGAAG AGTTAATTGA AGCGGGTAAA GCCTTTGGTG CTAGCCGCAT GAAATTGCTA
TTCAAAGTCG AACTCCCAGC AGCATTGCCA AGCATTATGG CGGGCGTTAC GCAGTGCATT
ATGTTGTCAC TTTCTATGGT GGTGATTGCT GCGCTAGTCG GTGCCGATGG CTTGGGTAAA
CCAGTCGTAC GAGCACTGAA CACGGTGAAC ATTTCTCAAG GCTTTGAAGC CGGTTTAGCG
ATTGTTTTGG TCGCGATTAT TCTCGACCGT TTGTGCAAAG CACCAAACCA AAAGGAGGCA
TAA
 
Protein sequence
MNFITDNKLP LGEWMETGVD WLTMNASGFF DAISIFLETI ILFVVDIFKW MPPAAPIIMT 
AAIAWFLHRS IPLVVFIVLA LLTILNLGYW QEMLETFVLV FAATTISVLI GVPLGIMAAH
RPWLYTLLRP ILDLMQTVPT FVYLIPTLVL FGLGIVPGLI STIIFAIAAP IRLTYLGITK
VPEELIEAGK AFGASRMKLL FKVELPAALP SIMAGVTQCI MLSLSMVVIA ALVGADGLGK
PVVRALNTVN ISQGFEAGLA IVLVAIILDR LCKAPNQKEA