| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06174 |
|---|
| Symbol | |
|---|
| ID | 5558082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 1353053 |
|---|
| End bp | 1353844 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640910648 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001448293 |
|---|
| Protein GI | 156977387 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTTT ACACTGTTGC CGTTATCATC GTTTTATTGT TTGCACTGGC AACGCAAATG
TTCAAGGTGC TGCGTGAGTA CGAGCGCGGC GTGGTGTTCT TTCTCGGTCG CTTCCAAGAA
GTGAAAGGAC CTGGTTTAAT CATCTTGATC CCCTTCATTC AACAAATGGT TCGCGTCGAC
CTTCGTACCA TTGTTTTGGA TGTTCCGACT CAAGATTTAA TCACCCGTGA CAATGTATCG
GTCAGAGTCA ATGCCGTGGT TTACTTCCGA GTTGTCGACC CACAAATGGC GATCAACAAC
ATTGAAAGTT ATAGCGACGC CACTAGCCAG CTAGCACAAA CAACGCTGCG TTCGGTGCTA
GGCCAACACG AACTGGATGA ATTGCTGTCA GAACGTGAGC GTCTCAATAA AGACCTCCAA
GCCATTCTTG ATCAGCAAAC TGACGATTGG GGAATCAAGA TAGCAACGGT TGAAGTGAAA
CATGTCGATC TTAACGACAG CATGGTGCGC GCTCTTGCCC GCCAAGCCGA AGCAGAACGT
AACCGCCGAG CGAAGATCAT CCACGCAACC GGTGAGTTAG AAGCGTCTAA CAAATTGAAA
GAAGCAGCAG AAATGCTCAA TGAAGCGCCC AATGCGTTGC AACTTCGATA CATGCAAACG
CTCACTGAAA TCACTACAGA CAAAACGTCA ACCATCATCT TCCCGCTGCC AATCAACCTT
GTCGAAGCGG TTTCCGACAT CGCCAAAGCT GTGAAGAACA ACCAAGGCGA AAAAGAGGAA
GAAAAAGAGT AA
|
|---|
| Protein sequence | MMLYTVAVII VLLFALATQM FKVLREYERG VVFFLGRFQE VKGPGLIILI PFIQQMVRVD
LRTIVLDVPT QDLITRDNVS VRVNAVVYFR VVDPQMAINN IESYSDATSQ LAQTTLRSVL
GQHELDELLS ERERLNKDLQ AILDQQTDDW GIKIATVEVK HVDLNDSMVR ALARQAEAER
NRRAKIIHAT GELEASNKLK EAAEMLNEAP NALQLRYMQT LTEITTDKTS TIIFPLPINL
VEAVSDIAKA VKNNQGEKEE EKE
|
|---|
| |