Gene VIBHAR_05924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05924 
Symbol 
ID5558310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1113081 
End bp1113650 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content44% 
IMG OID640910398 
Producthypothetical protein 
Protein accessionYP_001448044 
Protein GI156977138 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT CACTTTTCGC TACAGGATTA GCAATCGCTA TAGCACTACC GTTTGGTGCT 
AACGCTGCAG ATTATGTTAT CGATACCAAA GGTGCTCACG CATCAATCAA CTTCAAAGTT 
AGCCACCTAG GTTACAGCTT CATCAAAGGT CGTTTTAATA CATTTTCTGG TGACTTTTCT 
TTTGATGAAA AAAACATCGC TGACTCTAAA GTAAACGTAG TGGTTGATAC GACAAGCCTG 
GATTCAAACC ATGCTGAACG CGACAAGCAC ATCCGTAGCG GCGACTTCAT CGACGCAGGC 
AAATACAGCG AAGCGACGTT CAACAGTACA AAAGTTGTAG ACAAAGGTAA TGGTAAGCTA 
GGCGTAACGG GCGATCTGAC TCTTCACGGT GTAACGAAAC CAATCACAAT CGAAGCGGAA 
TTTGTTGGTG CAGGTAACGA CCCATGGGGT GGTGAGCGTG CAGGTTTCAT CGGTCAAACT 
CGTCTTGAGC TTGCTGATTT TGAAATTCCA GTAATGGGTT CTTCAAGCTA CGTTGATATG 
GAACTGCACA TCGAAGGTGT TAAGAAGTAA
 
Protein sequence
MKKSLFATGL AIAIALPFGA NAADYVIDTK GAHASINFKV SHLGYSFIKG RFNTFSGDFS 
FDEKNIADSK VNVVVDTTSL DSNHAERDKH IRSGDFIDAG KYSEATFNST KVVDKGNGKL 
GVTGDLTLHG VTKPITIEAE FVGAGNDPWG GERAGFIGQT RLELADFEIP VMGSSSYVDM 
ELHIEGVKK