Gene VIBHAR_05894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05894 
Symbol 
ID5558563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1086845 
End bp1087453 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content43% 
IMG OID640910368 
Producttwo component transcriptional regulator 
Protein accessionYP_001448014 
Protein GI156977108 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACG TTCTTATTAT CGACGACCAG CCGCTATATA GTGAAGCGCT TGCTTCTCTT 
GTTCAAACCG CTTTCCAATC TGTTAACGTC GTAGAGTCAA CAGACAGCGC TGAAGTGATG 
GATATCGTTC GTAACCAACC TGTCGATTTG GTTATTTTAG ATGTCGTACT GGGTGACCGA 
GACGGTATGC GCCTAGCGAA AAATATATTA GCGACGGGTT ACCAAGGTAA GATTTTGTTT 
ATTTCTTCTC GCGATTATTC GAGCTTGTCT AAAGCGGCAT TTGAAATGGG TGCACATGGC 
TTTTTGAATA AAAACGAAGC GAAAGCAACC ATTCTGGATG CTATTGTTAG CGTGACGCGT 
GGGTATTCCG TGTTTAAAGC GACGCATAAC CAATCATCGG GTAGCGTCAC TTTATCGAAT 
CGTGAAGCGA TGGTATTTCA CTATCTCGCT CAAGGTTACT CGAACAAGAA GATCTCAGAG 
CAACTGTCAT TGAGCGCTAA AACCATCAGT ACTTACAAAA CTCGTATCTT GAAGAAATAT 
CATGCTGAGT CAGTGGTCGA ACTACTGAAC ACACTTCCTC AAGAAGAATG CGGAAGCCTT 
TGCTGTTAG
 
Protein sequence
MNNVLIIDDQ PLYSEALASL VQTAFQSVNV VESTDSAEVM DIVRNQPVDL VILDVVLGDR 
DGMRLAKNIL ATGYQGKILF ISSRDYSSLS KAAFEMGAHG FLNKNEAKAT ILDAIVSVTR 
GYSVFKATHN QSSGSVTLSN REAMVFHYLA QGYSNKKISE QLSLSAKTIS TYKTRILKKY 
HAESVVELLN TLPQEECGSL CC