Gene VIBHAR_05890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05890 
Symbol 
ID5556602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1083396 
End bp1084376 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content43% 
IMG OID640910364 
Producthypothetical protein 
Protein accessionYP_001448010 
Protein GI156977104 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACG TAACCAGTAC TATTCTGACT GAAAGTGGTA CCAATGAGCT TGAAATCATT 
GAGTTCCATT TAGAAAAACA ATTGCCAGAT GGCAGCACAA AAACATGTTA TTACGGTATT 
AACGTCGCTA AAGTACGAGA AGTGATTCGC GTACCAGAGA CTACTGATTA TCCGAATGCA 
CAACCTCATA TGATCGGCGT ATTCTCGTCG CGCGACGTAT TAACACCTCT GGTTGACCTT 
GCTGGTTGGT TAGGTGTTCC TACTCGCCGT GATCTTGAGC GTAAGTTCGT TATCGTTACC 
GATTTCAACA AGATGACAAA TGGCTTCTTG ATTGACAGTA TTTCGCGTAT CCACCGTATT 
TCTTGGAACG ATGTGGAATC TCCAAGCCAA TTCTTAGAGG CGGGTGAGCA AGATTGTGTT 
GTGGCTGTTG TTCGTAAAGA TGGCAACCTG ATCATGATTC TGGATTTCGA GAAAATCATT 
GCAGACATCA ACCCAGAACT GAGTATGGAA AAATACGATG TGACTGGCGA TAAATCAGTA 
GACTTGAACC AACGTATGGT AGGTAAGCGT AACGCAAAAA CCATCATGGT GGTGGATGAC 
TCTGCGTTTA TTCGTTCATT GATTCAAGAT ACATTGGCTT CCGCGGGTTA TAACGTGATC 
ACCTGTAAAG ATGGTGGCGA AGCGTATGAA AAATTGATGA GCTTGGTCGA AGTCGCGAAA 
GAAGAAAACT TGCCAGTTCG TGAATTGCTT GATGCCGTTG TAACCGACGT AGAAATGCCT 
CGTATGGATG GTATGCACTT AGTCAAACGA CTGCGTGATA CGCAAGAATA TAACGAAATG 
CCTATCGTAA TGTTTTCTTC ATTAATGAGT GAAGATAACC GTGCGAAGGC GTTGTCCCTT 
GGTGCTAATG ACACCATCAC CAAGCCAGAG ATTGGCCGCA TGGTGAATAT GATGGACAAG 
CACGTATTTA ATTTCGCATA A
 
Protein sequence
MSNVTSTILT ESGTNELEII EFHLEKQLPD GSTKTCYYGI NVAKVREVIR VPETTDYPNA 
QPHMIGVFSS RDVLTPLVDL AGWLGVPTRR DLERKFVIVT DFNKMTNGFL IDSISRIHRI 
SWNDVESPSQ FLEAGEQDCV VAVVRKDGNL IMILDFEKII ADINPELSME KYDVTGDKSV 
DLNQRMVGKR NAKTIMVVDD SAFIRSLIQD TLASAGYNVI TCKDGGEAYE KLMSLVEVAK 
EENLPVRELL DAVVTDVEMP RMDGMHLVKR LRDTQEYNEM PIVMFSSLMS EDNRAKALSL 
GANDTITKPE IGRMVNMMDK HVFNFA