Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05843 |
Symbol | |
ID | 5556848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1027026 |
End bp | 1027937 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640910317 |
Product | transcriptional regulator |
Protein accession | YP_001447964 |
Protein GI | 156977058 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATTCTAT TTGGTAACCA CGCTGTGAAT AAAGATCTCG ACCTAAATCT CCTCAAAATT CTTGTGTTGC TGGAGCGTCA TCGTCAACTT AAACCTGTCG CGAAAGCGTT GGGTAAAAGC GAAGCGTCTA TAAGTAAGTA TCTCACCCGT TTACGAACGC AATTAGAGGA TGAACTGTTT ATCCGACACG CTCATCACTT TGAGCCTACG CATTATCTAA AGAGGAAGTT GCCCGAAATT ACGAATGCAC TTGATCAGCT AGAAACCTGC TTGATTAGAC GTGAGTTTGA TCCTCTGTCT TATGACAGGA GCATCACCAT CTGTTTGCCA CAATCCGCGC AGCAATCCTT TGGCCACCTG CTGTTGGATG ATCTGATGGA GTTGTTTCCT AATGCCCACG TCAATGTTGC AAGCAGCACG GATAGCACGA TCGATGAAAT CCTTGAAGAT AAAGTCGATA TGCAATTGCA TTACTTTAAT GAGGAATACC CAAAATCCAT TCATCAGCAA TTTATTGGTT ACGCTCCTGC CGTCATCGTC GTGCCTGCCG ATTTAGGTAT TACTGAAGTA GAAAAAGCGT GTGAGCTTAA ATTTATTCTA CTTGAGTTGG CAGGCTGGAA GGACAGGGAA CAAGTCACTA AACGAGCCCT TGAGCAGAGC GGACTTAACA TTGATCGAGT CGCTACTATC GGAAATATAA CCAGCTTACT TAAGGTTATT AGAATGAGAG GGGCAGCGAC GATTTTACTT GAGTATCAAA AACCAATTGA TGGCTTTAAT TTTATTCCTG TACCTGAAAC TTTTTATCCG CAGGGGCGCC CAAATGTGGT GGTACAAATG AAGCAAACGC ATCGCTACAA CTCGATGCAC CAGCTATTAA CTGATGCTAT CGCGAAATAT GTGATTACTT AG
|
Protein sequence | MILFGNHAVN KDLDLNLLKI LVLLERHRQL KPVAKALGKS EASISKYLTR LRTQLEDELF IRHAHHFEPT HYLKRKLPEI TNALDQLETC LIRREFDPLS YDRSITICLP QSAQQSFGHL LLDDLMELFP NAHVNVASST DSTIDEILED KVDMQLHYFN EEYPKSIHQQ FIGYAPAVIV VPADLGITEV EKACELKFIL LELAGWKDRE QVTKRALEQS GLNIDRVATI GNITSLLKVI RMRGAATILL EYQKPIDGFN FIPVPETFYP QGRPNVVVQM KQTHRYNSMH QLLTDAIAKY VIT
|
| |