Gene VIBHAR_05843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05843 
Symbol 
ID5556848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1027026 
End bp1027937 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content43% 
IMG OID640910317 
Producttranscriptional regulator 
Protein accessionYP_001447964 
Protein GI156977058 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCTAT TTGGTAACCA CGCTGTGAAT AAAGATCTCG ACCTAAATCT CCTCAAAATT 
CTTGTGTTGC TGGAGCGTCA TCGTCAACTT AAACCTGTCG CGAAAGCGTT GGGTAAAAGC
GAAGCGTCTA TAAGTAAGTA TCTCACCCGT TTACGAACGC AATTAGAGGA TGAACTGTTT
ATCCGACACG CTCATCACTT TGAGCCTACG CATTATCTAA AGAGGAAGTT GCCCGAAATT
ACGAATGCAC TTGATCAGCT AGAAACCTGC TTGATTAGAC GTGAGTTTGA TCCTCTGTCT
TATGACAGGA GCATCACCAT CTGTTTGCCA CAATCCGCGC AGCAATCCTT TGGCCACCTG
CTGTTGGATG ATCTGATGGA GTTGTTTCCT AATGCCCACG TCAATGTTGC AAGCAGCACG
GATAGCACGA TCGATGAAAT CCTTGAAGAT AAAGTCGATA TGCAATTGCA TTACTTTAAT
GAGGAATACC CAAAATCCAT TCATCAGCAA TTTATTGGTT ACGCTCCTGC CGTCATCGTC
GTGCCTGCCG ATTTAGGTAT TACTGAAGTA GAAAAAGCGT GTGAGCTTAA ATTTATTCTA
CTTGAGTTGG CAGGCTGGAA GGACAGGGAA CAAGTCACTA AACGAGCCCT TGAGCAGAGC
GGACTTAACA TTGATCGAGT CGCTACTATC GGAAATATAA CCAGCTTACT TAAGGTTATT
AGAATGAGAG GGGCAGCGAC GATTTTACTT GAGTATCAAA AACCAATTGA TGGCTTTAAT
TTTATTCCTG TACCTGAAAC TTTTTATCCG CAGGGGCGCC CAAATGTGGT GGTACAAATG
AAGCAAACGC ATCGCTACAA CTCGATGCAC CAGCTATTAA CTGATGCTAT CGCGAAATAT
GTGATTACTT AG
 
Protein sequence
MILFGNHAVN KDLDLNLLKI LVLLERHRQL KPVAKALGKS EASISKYLTR LRTQLEDELF 
IRHAHHFEPT HYLKRKLPEI TNALDQLETC LIRREFDPLS YDRSITICLP QSAQQSFGHL
LLDDLMELFP NAHVNVASST DSTIDEILED KVDMQLHYFN EEYPKSIHQQ FIGYAPAVIV
VPADLGITEV EKACELKFIL LELAGWKDRE QVTKRALEQS GLNIDRVATI GNITSLLKVI
RMRGAATILL EYQKPIDGFN FIPVPETFYP QGRPNVVVQM KQTHRYNSMH QLLTDAIAKY
VIT