Gene VIBHAR_05704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05704 
Symbol 
ID5557638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp907473 
End bp908735 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content48% 
IMG OID640910178 
Product3-hydroxy-3-methylglutaryl CoA reductase 
Protein accessionYP_001447825 
Protein GI156976919 
COG category[I] Lipid transport and metabolism 
COG ID[COG1257] Hydroxymethylglutaryl-CoA reductase 
TIGRFAM ID[TIGR00533] 3-hydroxy-3-methylglutaryl Coenzyme A reductase, hydroxymethylglutaryl-CoA reductase (NADP) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAT TAAATTTAGA CAGCGCAAGG AATAGCTCTG CACTCTCTGA GAATGGAACC 
TGCGAAAAAG TACAATCGGC ATTAGAACCG AAATACCACA AGCCAGAAAA GAAACTCTGC
CTTAGCGCAG GTCTGACGGA AAAGCACATT GCGCGCCGTT GGAAGTTGCT AGAATCCATG
ACGGACAAAG ATCTTATTCT GGATCCTTTT ACTCAATCGC ATTACGACCA ATACGCCAAC
AACATCGAAC ACTTTATTGG TACCGTTAAT GTTCCTGTTG GTGTTGCCGG CCCTCTGCGT
ATTAACGGCC TTTACGCGAA CGACGACTAC TTAGTCCCTC TCGCAACAAC AGAAGCTGCA
TTGGTCGCTT CTTACAACCG CGGTGCAAAC TTAATTACTG CCGCCGGTGG TGCAAGTACC
CTTTTGATCA GTGAAGGTGT TAGCCGTACA CCTGTGTTTG GCTTCCAATC TCTTGCAGAA
GCCGCGCAGT TCGTAAGTTG GGTGGTAACT CAATACGATA TCTTCCGTAA AGAAGCAGAA
TCCACCACCA CGCACGGCAA GCTAAAAGAC ATCAACGTGA ATATTGAAGG CAATCATGTT
TACTTGGTGT TTGAATACGT GACGGGCGAT GCGTCCGGTC AGAACATGGT CACCATCGCG
ACACACAAGG TATTCCACTA CATTCTCGAA CACAGCCCTA TCGCTCCGGT TGATGCTTAC
CTTGACGGTA ACTTGTCTGG TGATAAGAAG GCCAACGCTC ACACCTTGCG TTCCGTTCGC
GGTAAAAAAG TATCCGCTGA AGTGACGATT CCTGCGGCTT TGGTTAAGAA ATACCTGCAC
ACCACGCCAG AAGCCATGGT CAAATTTGGC AAGATGAATA CGGTCGGTGG CTTACTAAGT
GGCACCATAG GTATTAACGC ACACTACGCC AATGCCCTCA CCGCTTTGTA CATCGCATGC
GGCCAAGATG CGGCTTGCGT AGCAGAATCT GCGGTTGGTA TTACTCGAAT GGATGTGGAT
TCTCAAGGAA ACTTGTATAC CTCTGTCACC CTGCCAAATA TCATGGTTGG TACTGTAGGC
GGTGGTACTG GCTTGCCAAC TCAAAAAGCG TGTTTGGATA TCCTTGGTTT GCACGGAAAT
GGTAAAGCAA AGGCGTTAGC AGAAGTCGCT GCTGGTCTGT GTTTGGCTGG TGAGCTTTCA
ATTGTTGGTG CATTCTGTGC CGATCATTTC TCTCGTGCAC ATCATAAACT AGCAAGAAAG
TAA
 
Protein sequence
MPKLNLDSAR NSSALSENGT CEKVQSALEP KYHKPEKKLC LSAGLTEKHI ARRWKLLESM 
TDKDLILDPF TQSHYDQYAN NIEHFIGTVN VPVGVAGPLR INGLYANDDY LVPLATTEAA
LVASYNRGAN LITAAGGAST LLISEGVSRT PVFGFQSLAE AAQFVSWVVT QYDIFRKEAE
STTTHGKLKD INVNIEGNHV YLVFEYVTGD ASGQNMVTIA THKVFHYILE HSPIAPVDAY
LDGNLSGDKK ANAHTLRSVR GKKVSAEVTI PAALVKKYLH TTPEAMVKFG KMNTVGGLLS
GTIGINAHYA NALTALYIAC GQDAACVAES AVGITRMDVD SQGNLYTSVT LPNIMVGTVG
GGTGLPTQKA CLDILGLHGN GKAKALAEVA AGLCLAGELS IVGAFCADHF SRAHHKLARK