Gene VIBHAR_05440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05440 
Symbol 
ID5556664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp653634 
End bp654620 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content48% 
IMG OID640909917 
Productputative GTPase 
Protein accessionYP_001447572 
Protein GI156976666 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACATC GAGTACCTAC TAACATACTG ACGGGATTTC TTGGCGTCGG TAAAACCACG 
ACTATCCTGA ACTTACTGAA AAACAAACCA GAAAATGAAA ACTGGGCGGT GCTGGTGAAT
GAGTTTGGTG AGATAGGTAT CGATGGTGCG ATGATGACTG ACCAAGGTGC GATGATCAAA
GAAGTACCGG GTGGCTGCAT GTGCTGCACG GCAGGCGTAC CTATGTCTGT TGGTATCACG
GCTTTGCTGC GCCAGAACCC AGATCGTCTT CTTATTGAAC CAACGGGCTT GGGCCATCCA
AAGCAAGTGG TTGCGACACT AACCTCTGAG CAGTACCAGC CGTACGTGGA TCTTAAAGCA
ACGATTGCGT TGGTGGACCC GCGTAACCTA AGTAACGAGA AGTACCTTTC TAATAAAAAC
TTTGTCGACC AGCTTGATAG CGCAGACGTG GTTATTGGTA GCAAAGTTGA CCTGTGCACA
AGCCACGATA TCGATGTGTT CAACGATTGG GTGACCGATC AAACGCCTTC GAAAGTGTTC
AGCAAGCTGA TTCACGATGG TGACTTACCA ATTGAAGTAT TGGACATTGA GCGTGTGCAC
GGCAGTGCCT CTTCTCATAT TGAAGCGCAT CATCATGATC ACGCTCACCA AGAGCCTCAA
TTCCAACTGC CACCAGGGGA AGCGTTTATC CGTAAAGAGA ATAAAGGACA GGGCTACTTC
AGCTGCGGTT GGTTGTTTGG CGCGGAATAC TCGTTCAACT TTGATCAACT GTTCTCTATG
CTGTCTGAGC TAACGGCTGA ACGTGTCAAA GCGGTGATGA ACACTGACCA AGGTTGCTAC
GCGTTTAACG TTGCTAATGG TGTGGTTTCA GTCAATGAAA TGAGTCTGCA GGGCTTCGAA
TCACGCCTTG AGGTTATTGA TTCTCAATTG ATGCCTTGGG ATCAGTTGGA AGCGATTCTA
CTTAAGCTTT GTGGTATCTC AGAATAG
 
Protein sequence
MSHRVPTNIL TGFLGVGKTT TILNLLKNKP ENENWAVLVN EFGEIGIDGA MMTDQGAMIK 
EVPGGCMCCT AGVPMSVGIT ALLRQNPDRL LIEPTGLGHP KQVVATLTSE QYQPYVDLKA
TIALVDPRNL SNEKYLSNKN FVDQLDSADV VIGSKVDLCT SHDIDVFNDW VTDQTPSKVF
SKLIHDGDLP IEVLDIERVH GSASSHIEAH HHDHAHQEPQ FQLPPGEAFI RKENKGQGYF
SCGWLFGAEY SFNFDQLFSM LSELTAERVK AVMNTDQGCY AFNVANGVVS VNEMSLQGFE
SRLEVIDSQL MPWDQLEAIL LKLCGISE