Gene VIBHAR_05384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05384 
Symbol 
ID5558384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp610537 
End bp611778 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content46% 
IMG OID640909861 
Productpeptidase T 
Protein accessionYP_001447516 
Protein GI156976610 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2195] Di- and tripeptidases 
TIGRFAM ID[TIGR01882] peptidase T 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAA TTATGAAGCA TTTAGTTGAA AGATTTCTTC GCTACGTCAC GTTCGATACT 
CAATCTAACC CCCATGAATC AGCTTGTCCA AGTAGCAGCG GACAACTGGT GTTTGCACAG
TTGCTTAAAA AAGAAATGAT TGAGCTTGGC TTAAGCAATG TGACATTAAG TGATAACGGC
TACCTAATGG CAAAACTGCC ATCGAACGTT GATTATGATG TGCCTGCTAT TGGCTTTATC
GCACACATGG ATACCGCCCC TGATGCGTCT GGTAAAAATG TGAACCCTCA GTTTATCGAA
GACTATCAGG GTGGTGATAT TGCACTTGGT TTGGGCGATG AAGTGCTTTC TCCAGTGCAG
TATCCAGACT TACACGAGCT TCATGGTCAT AATCTGATTA CTACAGATGG CACAACACTC
CTAGGTGCAG ACAACAAAGC AGGCATTGCT GAGATTCTTT CTGCGGTCGC GATGCTGATT
GAAAATCCAG ACATCCCACA CGGTGATATT TGTATTGGCT TCACGCCAGA TGAAGAGATC
GGTCGTGGCG CTGACTTGTT TGATGTTGAG AAGTTCGGCG CGGAGTGGGC GTACACCATC
GATGGTGGCC CTCAAGGCGA GCTGGAATAC GAAAACTTCA ATGCAACCAG TGCGGATGTC
ACTTTCCATG GCGTGAGCGT TCATCCAGGC ACTGCGAAAG GCAAACTGGT TAATGCGATG
AACTTGGCGG CTAAATTCCA AGTGCAGATG CCAGAAGATC AAACGCCAGA AACTACAGAA
GGCTACGAAG GCTTCTTCCA CCTAAAATCT GGTGAACTTG GTGTGGCTCG TAGTGAGTTA
GGCTACATCA TTCGTGACTT TGACCGCGAA GGTCTGGAAA ATCGCAAAGC CTATATGCAG
AAGCTAGTCG ATGATATGAA CGCAGGCTTG AAGCACGGTT CTGTTGAGTT GAAGCTCACT
GACAGCTATT ACAACATGCG TGAAATGGTT GAACCATATC CACATATTAT CGATTTGGCG
AAACAAGCGA TGGAAGTGTG CAATGTTGAG CCTCTTATTA AGCCAATTCG TGGTGGTACA
GACGGTGCCC GTTTGTCGTT TATGGGCTTG CCTTGTCCGA ACATCTTCAC AGGTGGCTAC
AACTTCCACG GTATCCATGA ATTTATCTCC GTAGAGATGA TGGAGAAGTC TGTTCAAGTG
ATCGTTAAGA TTGCTGAGCT AACGGCCAAG AAGCACGGTT AA
 
Protein sequence
MRIIMKHLVE RFLRYVTFDT QSNPHESACP SSSGQLVFAQ LLKKEMIELG LSNVTLSDNG 
YLMAKLPSNV DYDVPAIGFI AHMDTAPDAS GKNVNPQFIE DYQGGDIALG LGDEVLSPVQ
YPDLHELHGH NLITTDGTTL LGADNKAGIA EILSAVAMLI ENPDIPHGDI CIGFTPDEEI
GRGADLFDVE KFGAEWAYTI DGGPQGELEY ENFNATSADV TFHGVSVHPG TAKGKLVNAM
NLAAKFQVQM PEDQTPETTE GYEGFFHLKS GELGVARSEL GYIIRDFDRE GLENRKAYMQ
KLVDDMNAGL KHGSVELKLT DSYYNMREMV EPYPHIIDLA KQAMEVCNVE PLIKPIRGGT
DGARLSFMGL PCPNIFTGGY NFHGIHEFIS VEMMEKSVQV IVKIAELTAK KHG