| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05320 |
|---|
| Symbol | codB |
|---|
| ID | 5556784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 553513 |
|---|
| End bp | 554751 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640909797 |
|---|
| Product | cytosine permease |
|---|
| Protein accession | YP_001447453 |
|---|
| Protein GI | 156976547 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1457] Purine-cytosine permease and related proteins |
|---|
| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGG ACAATAACTA CAGTCTTGGA CCGGTTCCTA ACACTGCCAG AAAAGGCGTG
GCATCATTAA CCATGGTTAT GTTGGGGCTC ACTTTCTTCT CCGCAAGCAT GTGGACGGGC
GGCTCGCTCG GTACCGGACT TTCTTTTGAT GATTTCTTCC TCGCTGTTCT CATTGGTAAC
CTAATCCTCG GCATCTACAC TTCTTTTCTT GGTTACATCG GCGCTTCTAC TGGTCTCTCT
ACTCACCTCC TTGCTCGTTT CTCTTTTGGC TCTAAAGGCT CTTGGCTTCC TTCCGCTCTT
CTTGGCGGCA CACAAGTTGG TTGGTTTGGT GTTGGCGTGG CGATGTTTGC TATTCCAGTA
AACAAAGCAA CAGGCATCGA TACAAACACG CTTATCATCA TTTCTGGTCT ATTAATGACT
GCGACGGTTT ACTTCGGTAT CTCTGCGCTT ATGGTGCTAT CTGCGATTGC AGTACCAGCA
ATTGCGTTAC TCGGCGGATA CTCGGTAGTA GAAGCGGTAA ACAGCTTGGG TGGTGTGGCT
GAACTACAAA AAGTACAACC AGTACAACCT ATCGACTTTT CAGTAGCGCT AGCAATGGTG
GTTGGCTCAT TCATCAGTGC GGGTACGTTA ACCGCAGACT TTGTTCGATT CGGCAAGAAG
CCAAAAGGCG CAGTGATGGT CACGATGGTG GCATTCTTTA TCGGTAACTC GCTGATGTTC
ATCTTCGGCG CAGCTGGTGC GGCGGTAACT GGCCAATCAG ACATTTCAGA AGTGATGATC
GCTCAAGGTC TTCTAATCCC AGCTATCATC GTGCTTGGTT TGAACATTTG GACAACCAAC
GACAATGCGC TTTACGCATC GGGCCTAGGT TTCTCAAACA TCACTGGTTT GCCAAGCAAA
TACATCTCTA TGGCGAACGG TTTAGTCGGT ACATTGTGTG CACTATGGTT GTACAATAAC
TTTGTAGGCT GGTTAACTTT CCTATCGCTT GCAATTCCAC CAATTGGCGG TGTAATCATT
GCGGACTTCT TCATGAACCG TAAACGTTAC ACAAATTTCG CAGCAGCAGA GTTCCAAACT
GTTAACTGGG CTGGCATTAT CGCAGTGGCG ATTGGTGTTG CAGCTGGTCA CTTCCTTCCG
GGAGTGGTAC CTGTAAACGC AGTACTGGGC GGCACAATCA GCTACCTGAT TCTAAATCCT
ATTCTTAATA AAAAGACACT GGCACAACAG CCAGCGTAA
|
|---|
| Protein sequence | MAADNNYSLG PVPNTARKGV ASLTMVMLGL TFFSASMWTG GSLGTGLSFD DFFLAVLIGN
LILGIYTSFL GYIGASTGLS THLLARFSFG SKGSWLPSAL LGGTQVGWFG VGVAMFAIPV
NKATGIDTNT LIIISGLLMT ATVYFGISAL MVLSAIAVPA IALLGGYSVV EAVNSLGGVA
ELQKVQPVQP IDFSVALAMV VGSFISAGTL TADFVRFGKK PKGAVMVTMV AFFIGNSLMF
IFGAAGAAVT GQSDISEVMI AQGLLIPAII VLGLNIWTTN DNALYASGLG FSNITGLPSK
YISMANGLVG TLCALWLYNN FVGWLTFLSL AIPPIGGVII ADFFMNRKRY TNFAAAEFQT
VNWAGIIAVA IGVAAGHFLP GVVPVNAVLG GTISYLILNP ILNKKTLAQQ PA
|
|---|
| |