Gene VIBHAR_05316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05316 
Symbol 
ID5556550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp549918 
End bp550571 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content47% 
IMG OID640909793 
Producthypothetical protein 
Protein accessionYP_001447449 
Protein GI156976543 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAAC TCAATAAGTC AGACCTCAGC AAATTTGAAC CTCAGTTCCT TCAATTTATG 
CAGCAAGAAA TGCAAACCGA CGCGGCCCAC GACCTGAGCC ACGTCCGCCG CGTAGTGAAA 
ACGGCTCGCC AGCTAGCAGA ACAAGAAGGT GCGGATTTAG CCGTTGTCCT GCCCGCAGCC 
TATCTGCACG ATTGCTTCAC TTATCCGAAA GACCACCCAA ATCGCAAACA AAGCTCCACG 
ATTGCAGCTA CCAAGGCGAT TTCGTTTCTA GAAAGCATCA ACTACCCTGC TCAGTACCAT 
GATGCCATCG CCCACGCGAT CGAATCCCAC AGCTTTAGTG CCAATATTAC GCCAAACACT 
TTAGAAGCTC AGGTTGTCCA AGATGCCGAT CGTTTAGATG CGCTTGGCGC AATTGGTGTG 
ACACGGTGCA TTCAAGTGAG CACGTTATTT GATGCCGCCT TGTATAACGA ACAGGACATG 
TTTGCAGAGC ATCGAGAATT GGAAGATAAA CGCTTTACCA TCGATCATTT CCAAACCAAA 
CTGTTTAAAA TTGTTGAAAC AATGAACACC AAAGCAGCGT ATGAAGAAGG TCGGAAACGT 
AAAGCATTTA TGGAGTCTTA CCTCGAACAG CTGCGCCAAG AAGTAGAAGG TTAA
 
Protein sequence
MPQLNKSDLS KFEPQFLQFM QQEMQTDAAH DLSHVRRVVK TARQLAEQEG ADLAVVLPAA 
YLHDCFTYPK DHPNRKQSST IAATKAISFL ESINYPAQYH DAIAHAIESH SFSANITPNT 
LEAQVVQDAD RLDALGAIGV TRCIQVSTLF DAALYNEQDM FAEHRELEDK RFTIDHFQTK 
LFKIVETMNT KAAYEEGRKR KAFMESYLEQ LRQEVEG