Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05269 |
Symbol | |
ID | 5557053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 514579 |
End bp | 515445 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640909746 |
Product | transcriptional regulator |
Protein accession | YP_001447402 |
Protein GI | 156976496 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGC TGCGGTTAAT GTCTCTGTTC GTTCATATTG TGGAGTGTGG CTCAATCTCG AAAGCAGCAG AGAAGTTGGA ACTCTCCAAG TCGGTGCTCA GCTCTGCTCT TAAGCAGCTC GAGCAAGAGC TAGATACGTG TTTACTCAAG CGTACGACGA GGAGACAAAC GTTGACCTCT GCGGGCGAAC GCTTTTATAA ACAATGTGCG CAGATGACAA AACAGGCGGA AGAGGCGTGG TTAGAAGCGG CAGAGTTAAA GCAAGTCCCA ATGGGAACTC TTACCGTTAC CGCGCCAAAT GCGTTGATGC GTTCTATAGT ATTGCCTGCT TTAACGGAGG CTTTTGCACA GTACCCTGAT GTGCATTTAA ATTTAGTCAG CGACGATAAG CATGTTGATA TTGTTCAGCA GGATATTGAT CTTGCAGTGA GAGTTGGAGC GTCTGGTGAT TCGAACATTA AACAACGTAA AGTAGGGCAG TTTTGTGATG TATTATGTCG AGCTAAAGAG ATGCATACTG ATATTGAAAG TACTTTTTAT ATCGCTCAAC ACTGGCAGAT AGAACCGATT GCCCATAACT TCACTCTGAA TGGTCAAGAT CACCTAGTGC AATACTCAGT AAAGCATCGT GCAAACACCG TGTTCGATGT GGCGAGCCTT CTAGAAATGG GACTAGGCTT TGGGATTCTG CCAGATTTTA TGCTGGCCTC GAATCCACTT CTTGAACCTG TGCCTGATGC GAAAGCATCG AAAGCGAACC CGATTTACGT GTTGCATCCT TACCATGCAC ATGTGCCGAT GTCGGTGACA TTAGCGATAA AGGCAATTGA AGATCGTATC GAAGAAGTGA TTTCATGTGA AAACTGA
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Protein sequence | MNKLRLMSLF VHIVECGSIS KAAEKLELSK SVLSSALKQL EQELDTCLLK RTTRRQTLTS AGERFYKQCA QMTKQAEEAW LEAAELKQVP MGTLTVTAPN ALMRSIVLPA LTEAFAQYPD VHLNLVSDDK HVDIVQQDID LAVRVGASGD SNIKQRKVGQ FCDVLCRAKE MHTDIESTFY IAQHWQIEPI AHNFTLNGQD HLVQYSVKHR ANTVFDVASL LEMGLGFGIL PDFMLASNPL LEPVPDAKAS KANPIYVLHP YHAHVPMSVT LAIKAIEDRI EEVISCEN
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