Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05225 |
Symbol | |
ID | 5557257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 478740 |
End bp | 479657 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640909702 |
Product | hypothetical protein |
Protein accession | YP_001447358 |
Protein GI | 156976452 |
COG category | [R] General function prediction only |
COG ID | [COG3608] Predicted deacylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCG GATACACTTA CCCAATCGGT ACCCCAGGTC AGCCTTGGGG CGAAGCAGAA CGTAAAGCTT GGTGCGAACA ACGTGACGTA AAACGTAGCT ACCAAGATGA AGTTGTGACG AAAATTGATG CTCTTCGTGA ACGTTTCGAT GTTGAGCAAT ACGGCGCGCT TTCATACGAC GAAGCACGCT TCCCTCTGTT TTGTATCAAA ACTCGTAACT GGGATGCAGC AAAGCCTGTT GTTTTGGTAA CTGGCGGCGT ACACGGCTAC GAGACAAGTG GCGTACACGG CGCGTTGAAG TTTGTTGATA CACAGGCAGA GCGTTATGCA GAACACTTCA ATATTGTGGT TGTGCCATGT GTGAGCCCTT GGGGCTATGA AGTGATTAAC CGCTGGAACC CAAATGCGAT TGATCCAAAC CGCTCTTTCT ACGCAGACAG CCCAGCAGAA GAGTCAGCAA ACTTGATCAA GCTAGTTGCA ACGCTAGGTG ATGTTCTAAT GCACATCGAC CTTCACGAAA CCACTGATTC TGACGAGACC GAATTCCGTC CTGCACTTGC AGCGCGTGAT GGTCTTGAAT ACATCGAAGG CATGATCCCA GATGGTTTCT ACACGGTCGG TGATACAGAA AACCCGCAAC CTGAGTTCCA AAAAGCAGTC ATAGAGTCAG TAGCGAAAGT AACGCACATT GCACCTGCTG ACGATAAAGG CGAAATCATT GGCTCGCCAG TGGTGCAATT TGGCGTCATT AATTACCCAA TGGTAAAACT GGGTTTGTGT GGCGGCGTAA CCAACTGCAC TTACGGCACC ACAACAGAAG TTTACCCAGA CAGCCCGAAA GTGACTGATG AAGAGTGTAA CGACGCTCAA GTTGCAGCAG TAGTAGGCGG CTTAGACTAC GTGCTCGCTC AGCTATAA
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Protein sequence | MKSGYTYPIG TPGQPWGEAE RKAWCEQRDV KRSYQDEVVT KIDALRERFD VEQYGALSYD EARFPLFCIK TRNWDAAKPV VLVTGGVHGY ETSGVHGALK FVDTQAERYA EHFNIVVVPC VSPWGYEVIN RWNPNAIDPN RSFYADSPAE ESANLIKLVA TLGDVLMHID LHETTDSDET EFRPALAARD GLEYIEGMIP DGFYTVGDTE NPQPEFQKAV IESVAKVTHI APADDKGEII GSPVVQFGVI NYPMVKLGLC GGVTNCTYGT TTEVYPDSPK VTDEECNDAQ VAAVVGGLDY VLAQL
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