Gene VIBHAR_05027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05027 
Symbol 
ID5558326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp277999 
End bp279009 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content50% 
IMG OID640909505 
Producthypothetical protein 
Protein accessionYP_001447161 
Protein GI156976255 
COG category 
COG ID 
TIGRFAM ID[TIGR01551] phage major capsid protein, P2 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAATG CCGTATCGAC TCAATTTTTA GATGAATATT GTCAAGCCGT GGCTAAAGCC 
GGCGGTGTAG CGGATGCCTC AAAGCAGTTC AACATTACCC CAGTGATGGA AACCAGGCTT
CGCCAAGCGA TTGTCGAATC GGACGCGTTT TTAAATCGTA TCTCCAATAT CTCGGTTGAC
CAGATTAAAG GTCAAGTGAT TGATGTGGGT GACGCGGGTC TACTGACAGG GCGTGTCAAA
GACGGTCGTT TCATGGGCGC TCTTGACCAA AGTGGTAACA CCTATGAGTT AACCGAGACC
GACTCAGGCG CTCACATCAA TTGGATCACC ATGACCATCT GGGCGAACTC GGGCGGTAAA
GGCCAGTGGA TGAAGCTGAT GAATAACGCT ATCACACGTA ATTTTGCGCT CGATAAGCTG
CGTATTGGTT TTCACGGAAC CTCGATTGCG GGTGAAAACA CCGACCCGAA AGCGAACCCA
ATGGGTGAAG ACGTTAATAA AGGTTGGCTG CAGCTTGCAA AAGAAAAGGC GCCGGCTCAA
GTCCTGCCTG ATGCGAAGCT TGATTCTACG GGCAACACAG ACGGCGCGTA TAAAAACCTC
GACTCGCTCG TGAACGATTT AATCAACACC ACGATTCACG AAGTACATCA AGACGATCCT
GATTTGGTTG TGCTGATTGG TCGTAACTTA GTCGCTGCAG AGCAGCATCG CTTGTTGGAA
TCGGCGGAAG TACCGACCGA GCACAAAGCC GCGCAAAGTT TGGCGAAGAC AGTGGCAGGC
AAAACCGTCT ATACCCCACC ATTTTTCCCG CCCAATATGA TTTGGGTAAC GAACTTAACC
AACCTGCAAA TCCTGACTCA AAAAGGGACG CAGTGGCGTA AGTCTCGCAA TGAAGAAGAC
CGTAAACGCT TTGAAACGTC ATACCTGCGT ATGGAAGGGT ATGCCGTCGG TAACTACCAC
AAGTTTGCCG CGATTGAAGA CGTGACCGTT GTTGAATCTG CGAAGGGGTA A
 
Protein sequence
MLNAVSTQFL DEYCQAVAKA GGVADASKQF NITPVMETRL RQAIVESDAF LNRISNISVD 
QIKGQVIDVG DAGLLTGRVK DGRFMGALDQ SGNTYELTET DSGAHINWIT MTIWANSGGK
GQWMKLMNNA ITRNFALDKL RIGFHGTSIA GENTDPKANP MGEDVNKGWL QLAKEKAPAQ
VLPDAKLDST GNTDGAYKNL DSLVNDLINT TIHEVHQDDP DLVVLIGRNL VAAEQHRLLE
SAEVPTEHKA AQSLAKTVAG KTVYTPPFFP PNMIWVTNLT NLQILTQKGT QWRKSRNEED
RKRFETSYLR MEGYAVGNYH KFAAIEDVTV VESAKG