| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_04931 |
|---|
| Symbol | |
|---|
| ID | 5558172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 196308 |
|---|
| End bp | 197324 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640909410 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001447066 |
|---|
| Protein GI | 156976160 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGG GTATAGTTGG GATACTGCGC AACGGACAAA GTGAGGCCAG CATTGGTCTT
CGAGCCGATA TGGATGCGCT TCATGTACAT GAGAAAAATA CCTTTTCTTA CTGCTCTCAG
CATGATGGGA AGATGCACGC CTGTGGCCAC GATGGACATT CTGCCATGCT GCTTGGTGCC
GCTTGCTATC TTGCCGAATA CGGTGAATTT GACGGGACAG TTTACTTCAT ATTTCAACCC
GATGAAGAGC ATGGAAAAGG GGCGCAAGCC ATTATTGACG ATGGGTTGTT TGAGCGATTC
TCCATCGATG AAGTCTATGG CATTCACAAC TTTCCGGGAC TAGCGGAAGG GAAATTGATG
GTCAGGCCCG GTTCATTGAT GGCTAGTGAG ACAAGCTTTG AAATTGTGAT TAAAGGTGTC
GGTGGGCATG CCGCTCTACC ACACCAAGGG GTAGATCCTC TTGTGGTCGG TGCACAGGTT
ATTTTGGGGC TGCAAACCAT CGTTTCGCGA AGCTTAAGCG CAATTCATGA CTCTGCGGTG
GTATCCGCAA CGGAATTTAT CACCGACGGC ACGGTGAATG TTATCCCTAC AACGGTGACC
ATTAAAGGAG ACTGTCGCTG CTTTACCGAG CGCAGCCTAG ATACTATCCG AACGCGCATG
GAACAAATTG TGGCAGGGCT TTGCCAAGCG GCAGGTGCGG ATTACACGTT AGAATTCATC
AATACATTTT ATCCGACCAT CAACAGCCAT GAACAAACCG CTTATGCCGT GTCGACTGCG
CAGCAAGTGT TGGGAATTAA CAACGTTGAT GGCGATTGTG ACCCGATAAC CATCTCGGAA
GACTTCTCCA GCATGTTACG TGTTAAGCCG GGCTGTTATG TGTTGCTCGG TAATGGCGTT
GATTCTGTTG GTGGATGTGC ATTGCACAAC CCTAAATACG ATTTTAACGA TCGGATTTTG
AAATTCGGTA CGAGTTACTG GATTCAATTG GTTAGAAATC GATTGAACCC ATCGTAA
|
|---|
| Protein sequence | MITGIVGILR NGQSEASIGL RADMDALHVH EKNTFSYCSQ HDGKMHACGH DGHSAMLLGA
ACYLAEYGEF DGTVYFIFQP DEEHGKGAQA IIDDGLFERF SIDEVYGIHN FPGLAEGKLM
VRPGSLMASE TSFEIVIKGV GGHAALPHQG VDPLVVGAQV ILGLQTIVSR SLSAIHDSAV
VSATEFITDG TVNVIPTTVT IKGDCRCFTE RSLDTIRTRM EQIVAGLCQA AGADYTLEFI
NTFYPTINSH EQTAYAVSTA QQVLGINNVD GDCDPITISE DFSSMLRVKP GCYVLLGNGV
DSVGGCALHN PKYDFNDRIL KFGTSYWIQL VRNRLNPS
|
|---|
| |